This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183480026
OMFI01004186
204388
Verrucomicrobiota
CAT
Met
>WENV183480069
OMFI01005876
406043
Verrucomicrobiota
GCA
Cys
>WENV183479776
OMFI01000196
293125
Verrucomicrobiota
GAA
Phe
>WENV183480105
OMFI01007140
406350
Verrucomicrobiota
TGT
Thr
>WENV183480031
OMFI01004296
148006
Verrucomicrobiota
CAA
Leu
>WENV183479872
OMFI01000862
101600
Verrucomicrobiota
AAG
Leu
>WENV183480106
OMFI01007299
293105
Verrucomicrobiota
CAT
Met
>WENV183479789
OMFI01000265
405901
Verrucomicrobiota
GCC
Gly
>WENV183479994
OMFI01003196
483642
Verrucomicrobiota
CCC
Gly
>WENV183480043
OMFI01004734
8960
Verrucomicrobiota
CGA
Ser
>WENV183479735
OMFI01000092
101463
Verrucomicrobiota
TAA
Leu
>WENV183479867
OMFI01000815
157427
Verrucomicrobiota
GTC
Asp
>WENV183479812
OMFI01000417
293079
Verrucomicrobiota
CGC
Ala
>WENV183479760
OMFI01000133
120352
Verrucomicrobiota
TAG
Leu
>WENV183479736
OMFI01000092
292636
Verrucomicrobiota
>WENV183479995
OMFI01003196
489412
Verrucomicrobiota
TCC
Gly
>WENV183480070
OMFI01005876
298263
Verrucomicrobiota
TTC
Glu
>WENV183479772
OMFI01000177
293069
Verrucomicrobiota
CTT
Lys
>WENV183479903
OMFI01001265
406336
Verrucomicrobiota
CCT
Arg
>WENV183479940
OMFI01001777
406369
Verrucomicrobiota
CCG
Arg
>WENV183480261
OMFI01024607
405940
Verrucomicrobiota
GGT
Thr
>WENV183480136
OMFI01009500
406044
Verrucomicrobiota
CTG
Gln
>WENV183479794
OMFI01000325
187556
Verrucomicrobiota
GGG
Pro
>WENV183479939
OMFI01001708
406037
Verrucomicrobiota
GTG
His
>WENV183479884
OMFI01001055
406360
Verrucomicrobiota
GAC
Val
>WENV183479829
OMFI01000539
187548
Verrucomicrobiota
TCT
Arg
>WENV183479771
OMFI01000177
406040
Verrucomicrobiota
CGT
Thr
>WENV183479913
OMFI01001373
57652
Verrucomicrobiota
TGA
Ser
>WENV183479954
OMFI01002133
406039
Verrucomicrobiota
CAC
Val
>WENV183479853
OMFI01000738
75458
Verrucomicrobiota
CAG
Leu
>WENV183479838
OMFI01000640
406368
Verrucomicrobiota
TTG
Gln
>WENV183479782
OMFI01000237
21159
Verrucomicrobiota
GGA
Ser
>WENV183479768
OMFI01000164
101461
Verrucomicrobiota
GTA
Tyr
>WENV183479982
OMFI01002880
293095
Verrucomicrobiota
TTT
Lys
>WENV183479805
OMFI01000373
187561
Verrucomicrobiota
CGG
Pro
>WENV183479871
OMFI01000849
406342
Verrucomicrobiota
CAT
Met
>WENV183479767
OMFI01000164
406351
Verrucomicrobiota
GTT
Asn
>WENV183480000
OMFI01003278
303305
Verrucomicrobiota
GGC
Ala
>WENV183479900
OMFI01001229
406346
Verrucomicrobiota
TAC
Val
>WENV183479915
OMFI01001435
8938
Verrucomicrobiota
GCT
Ser
>WENV183479777
OMFI01000196
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK