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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183481400
OMFK01000103
406043
Verrucomicrobiota
GCA
Cys
>WENV183481260
OMFK01000015
293125
Verrucomicrobiota
GAA
Phe
>WENV183481381
OMFK01000079
406350
Verrucomicrobiota
TGT
Thr
>WENV183481213
OMFK01000002
148006
Verrucomicrobiota
CAA
Leu
>WENV183481399
OMFK01000103
101600
Verrucomicrobiota
AAG
Leu
>WENV183481501
OMFK01000386
293105
Verrucomicrobiota
CAT
Met
>WENV183481218
OMFK01000003
405901
Verrucomicrobiota
GCC
Gly
>WENV183481368
OMFK01000068
405901
Verrucomicrobiota
GCC
Gly
>WENV183481263
OMFK01000015
483642
Verrucomicrobiota
CCC
Gly
>WENV183481240
OMFK01000007
229220
Verrucomicrobiota
CAT
Met
>WENV183481355
OMFK01000060
8960
Verrucomicrobiota
CGA
Ser
>WENV183481209
OMFK01000002
101463
Verrucomicrobiota
TAA
Leu
>WENV183481215
OMFK01000003
157427
Verrucomicrobiota
GTC
Asp
>WENV183481374
OMFK01000074
157427
Verrucomicrobiota
GTC
Asp
>WENV183481382
OMFK01000079
293079
Verrucomicrobiota
CGC
Ala
>WENV183481214
OMFK01000002
120352
Verrucomicrobiota
TAG
Leu
>WENV183481210
OMFK01000002
292636
Verrucomicrobiota
>WENV183481401
OMFK01000103
298263
Verrucomicrobiota
TTC
Glu
>WENV183481499
OMFK01000386
298263
Verrucomicrobiota
TTC
Glu
>WENV183481344
OMFK01000050
293069
Verrucomicrobiota
CTT
Lys
>WENV183481208
OMFK01000002
406336
Verrucomicrobiota
CCT
Arg
>WENV183481264
OMFK01000015
406369
Verrucomicrobiota
CCG
Arg
>WENV183481300
OMFK01000027
405940
Verrucomicrobiota
GGT
Thr
>WENV183481220
OMFK01000003
406044
Verrucomicrobiota
CTG
Gln
>WENV183481262
OMFK01000015
187556
Verrucomicrobiota
GGG
Pro
>WENV183481500
OMFK01000386
406037
Verrucomicrobiota
GTG
His
>WENV183481297
OMFK01000026
406360
Verrucomicrobiota
GAC
Val
>WENV183481207
OMFK01000001
187548
Verrucomicrobiota
TCT
Arg
>WENV183481343
OMFK01000050
406040
Verrucomicrobiota
CGT
Thr
>WENV183481367
OMFK01000068
57652
Verrucomicrobiota
TGA
Ser
>WENV183481217
OMFK01000003
406039
Verrucomicrobiota
CAC
Val
>WENV183481219
OMFK01000003
406368
Verrucomicrobiota
TTG
Gln
>WENV183481373
OMFK01000074
21159
Verrucomicrobiota
GGA
Ser
>WENV183481239
OMFK01000007
101461
Verrucomicrobiota
GTA
Tyr
>WENV183481206
OMFK01000001
293095
Verrucomicrobiota
TTT
Lys
>WENV183481345
OMFK01000050
187561
Verrucomicrobiota
CGG
Pro
>WENV183481366
OMFK01000068
406342
Verrucomicrobiota
CAT
Met
>WENV183481238
OMFK01000007
406351
Verrucomicrobiota
GTT
Asn
>WENV183481216
OMFK01000003
303305
Verrucomicrobiota
GGC
Ala
>WENV183481259
OMFK01000015
507474
Verrucomicrobiota
TCC
Gly
>WENV183481298
OMFK01000026
406346
Verrucomicrobiota
TAC
Val
>WENV183481211
OMFK01000002
8938
Verrucomicrobiota
GCT
Ser
>WENV183481261
OMFK01000015
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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