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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183485270
OMFP01029961
293105
Verrucomicrobiota
CAT
Met
>WENV183485095
OMFP01010970
405901
Verrucomicrobiota
GCC
Gly
>WENV183485075
OMFP01009685
483642
Verrucomicrobiota
CCC
Gly
>WENV183485142
OMFP01014799
8960
Verrucomicrobiota
CGA
Ser
>WENV183485251
OMFP01027052
101463
Verrucomicrobiota
TAA
Leu
>WENV183485179
OMFP01017571
157427
Verrucomicrobiota
GTC
Asp
>WENV183484870
OMFP01002474
120352
Verrucomicrobiota
TAG
Leu
>WENV183485011
OMFP01006738
292636
Verrucomicrobiota
>WENV183485328
OMFP01037052
406369
Verrucomicrobiota
CCG
Arg
>WENV183485313
OMFP01035566
187556
Verrucomicrobiota
GGG
Pro
>WENV183485004
OMFP01006498
406360
Verrucomicrobiota
GAC
Val
>WENV183484990
OMFP01005776
187548
Verrucomicrobiota
TCT
Arg
>WENV183485312
OMFP01035466
406040
Verrucomicrobiota
CGT
Thr
>WENV183484975
OMFP01005120
57652
Verrucomicrobiota
TGA
Ser
>WENV183485143
OMFP01015104
406039
Verrucomicrobiota
CAC
Val
>WENV183485051
OMFP01008365
75458
Verrucomicrobiota
CAG
Leu
>WENV183485396
OMFP01057752
21159
Verrucomicrobiota
GGA
Ser
>WENV183484968
OMFP01004730
101461
Verrucomicrobiota
GTA
Tyr
>WENV183485083
OMFP01009977
293095
Verrucomicrobiota
TTT
Lys
>WENV183485402
OMFP01060826
187561
Verrucomicrobiota
CGG
Pro
>WENV183485216
OMFP01021736
406342
Verrucomicrobiota
CAT
Met
>WENV183485228
OMFP01023411
406351
Verrucomicrobiota
GTT
Asn
>WENV183485218
OMFP01022455
406346
Verrucomicrobiota
TAC
Val
>WENV183485157
OMFP01015990
8938
Verrucomicrobiota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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