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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183486468
OMFR01001122
204388
Verrucomicrobiota
CAT
Met
>WENV183486684
OMFR01004045
406043
Verrucomicrobiota
GCA
Cys
>WENV183486647
OMFR01003110
293125
Verrucomicrobiota
GAA
Phe
>WENV183486437
OMFR01000841
406350
Verrucomicrobiota
TGT
Thr
>WENV183486610
OMFR01002589
148006
Verrucomicrobiota
CAA
Leu
>WENV183486448
OMFR01000960
101600
Verrucomicrobiota
AAG
Leu
>WENV183486741
OMFR01007077
293105
Verrucomicrobiota
CAT
Met
>WENV183486557
OMFR01001820
405901
Verrucomicrobiota
GCC
Gly
>WENV183486445
OMFR01000903
483642
Verrucomicrobiota
CCC
Gly
>WENV183486384
OMFR01000558
8960
Verrucomicrobiota
CGA
Ser
>WENV183486682
OMFR01004006
101463
Verrucomicrobiota
TAA
Leu
>WENV183486517
OMFR01001513
157427
Verrucomicrobiota
GTC
Asp
>WENV183486449
OMFR01000968
293079
Verrucomicrobiota
CGC
Ala
>WENV183486442
OMFR01000877
120352
Verrucomicrobiota
TAG
Leu
>WENV183486683
OMFR01004006
292636
Verrucomicrobiota
>WENV183486444
OMFR01000903
489412
Verrucomicrobiota
TCC
Gly
>WENV183486459
OMFR01001073
298263
Verrucomicrobiota
TTC
Glu
>WENV183486576
OMFR01002119
298263
Verrucomicrobiota
TTC
Glu
>WENV183486323
OMFR01000306
293069
Verrucomicrobiota
CTT
Lys
>WENV183486605
OMFR01002468
406336
Verrucomicrobiota
CCT
Arg
>WENV183486623
OMFR01002866
406369
Verrucomicrobiota
CCG
Arg
>WENV183486330
OMFR01000337
405940
Verrucomicrobiota
GGT
Thr
>WENV183486721
OMFR01005778
406044
Verrucomicrobiota
CTG
Gln
>WENV183486573
OMFR01002074
187556
Verrucomicrobiota
GGG
Pro
>WENV183486699
OMFR01004603
406037
Verrucomicrobiota
GTG
His
>WENV183486548
OMFR01001748
406360
Verrucomicrobiota
GAC
Val
>WENV183486407
OMFR01000642
187548
Verrucomicrobiota
TCT
Arg
>WENV183486322
OMFR01000306
406040
Verrucomicrobiota
CGT
Thr
>WENV183486819
OMFR01012485
57652
Verrucomicrobiota
TGA
Ser
>WENV183486666
OMFR01003492
406039
Verrucomicrobiota
CAC
Val
>WENV183486382
OMFR01000550
75458
Verrucomicrobiota
CAG
Leu
>WENV183486581
OMFR01002201
406368
Verrucomicrobiota
TTG
Gln
>WENV183486268
OMFR01000164
21159
Verrucomicrobiota
GGA
Ser
>WENV183486527
OMFR01001616
101461
Verrucomicrobiota
GTA
Tyr
>WENV183486343
OMFR01000381
293095
Verrucomicrobiota
TTT
Lys
>WENV183486321
OMFR01000306
187561
Verrucomicrobiota
CGG
Pro
>WENV183486815
OMFR01012038
406342
Verrucomicrobiota
CAT
Met
>WENV183486219
OMFR01000090
406351
Verrucomicrobiota
GTT
Asn
>WENV183486534
OMFR01001670
303305
Verrucomicrobiota
GGC
Ala
>WENV183486680
OMFR01003951
406346
Verrucomicrobiota
TAC
Val
>WENV183486520
OMFR01001566
8938
Verrucomicrobiota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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