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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183489486
OMGA01003612
204388
Verrucomicrobiota
CAT
Met
>WENV183489566
OMGA01005820
293125
Verrucomicrobiota
GAA
Phe
>WENV183489921
OMGA01045272
101600
Verrucomicrobiota
AAG
Leu
>WENV183489696
OMGA01012832
293105
Verrucomicrobiota
CAT
Met
>WENV183489771
OMGA01018942
405901
Verrucomicrobiota
GCC
Gly
>WENV183489604
OMGA01007199
8960
Verrucomicrobiota
CGA
Ser
>WENV183489527
OMGA01004552
157427
Verrucomicrobiota
GTC
Asp
>WENV183489714
OMGA01013715
293079
Verrucomicrobiota
CGC
Ala
>WENV183489487
OMGA01003637
120352
Verrucomicrobiota
TAG
Leu
>WENV183489594
OMGA01006998
292636
Verrucomicrobiota
>WENV183489669
OMGA01010263
489412
Verrucomicrobiota
TCC
Gly
>WENV183489674
OMGA01010712
298263
Verrucomicrobiota
TTC
Glu
>WENV183489668
OMGA01010248
293069
Verrucomicrobiota
CTT
Lys
>WENV183489836
OMGA01026382
406336
Verrucomicrobiota
CCT
Arg
>WENV183489621
OMGA01007965
406369
Verrucomicrobiota
CCG
Arg
>WENV183489561
OMGA01005704
406044
Verrucomicrobiota
CTG
Gln
>WENV183489780
OMGA01019313
406037
Verrucomicrobiota
GTG
His
>WENV183489804
OMGA01021788
406360
Verrucomicrobiota
GAC
Val
>WENV183489485
OMGA01003580
187548
Verrucomicrobiota
TCT
Arg
>WENV183489667
OMGA01010248
406040
Verrucomicrobiota
CGT
Thr
>WENV183489690
OMGA01011830
57652
Verrucomicrobiota
TGA
Ser
>WENV183489650
OMGA01009090
406039
Verrucomicrobiota
CAC
Val
>WENV183489454
OMGA01002772
75458
Verrucomicrobiota
CAG
Leu
>WENV183489613
OMGA01007444
406368
Verrucomicrobiota
TTG
Gln
>WENV183489781
OMGA01019345
21159
Verrucomicrobiota
GGA
Ser
>WENV183489638
OMGA01008551
101461
Verrucomicrobiota
GTA
Tyr
>WENV183489948
OMGA01051823
293095
Verrucomicrobiota
TTT
Lys
>WENV183489808
OMGA01022133
187561
Verrucomicrobiota
CGG
Pro
>WENV183489595
OMGA01007025
406351
Verrucomicrobiota
GTT
Asn
>WENV183489599
OMGA01007068
303305
Verrucomicrobiota
GGC
Ala
>WENV183489702
OMGA01013137
406346
Verrucomicrobiota
TAC
Val
>WENV183489687
OMGA01011749
8938
Verrucomicrobiota
GCT
Ser
>WENV183489567
OMGA01005820
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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