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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183493505
OMGJ01000198
406043
Verrucomicrobiota
GCA
Cys
>WENV183493604
OMGJ01000635
293125
Verrucomicrobiota
GAA
Phe
>WENV183494045
OMGJ01036695
406350
Verrucomicrobiota
TGT
Thr
>WENV183494059
OMGJ01044592
148006
Verrucomicrobiota
CAA
Leu
>WENV183493795
OMGJ01004203
101600
Verrucomicrobiota
AAG
Leu
>WENV183493631
OMGJ01000732
293105
Verrucomicrobiota
CAT
Met
>WENV183493725
OMGJ01001932
405901
Verrucomicrobiota
GCC
Gly
>WENV183493737
OMGJ01002300
405901
Verrucomicrobiota
GCC
Gly
>WENV183493590
OMGJ01000593
483642
Verrucomicrobiota
CCC
Gly
>WENV183493535
OMGJ01000276
229220
Verrucomicrobiota
CAT
Met
>WENV183493606
OMGJ01000640
8960
Verrucomicrobiota
CGA
Ser
>WENV183493754
OMGJ01002695
101463
Verrucomicrobiota
TAA
Leu
>WENV183493470
OMGJ01000114
157427
Verrucomicrobiota
GTC
Asp
>WENV183493498
OMGJ01000185
157427
Verrucomicrobiota
GTC
Asp
>WENV183493500
OMGJ01000189
293079
Verrucomicrobiota
CGC
Ala
>WENV183493448
OMGJ01000064
120352
Verrucomicrobiota
TAG
Leu
>WENV183493684
OMGJ01001420
292636
Verrucomicrobiota
>WENV183493506
OMGJ01000198
298263
Verrucomicrobiota
TTC
Glu
>WENV183493629
OMGJ01000732
298263
Verrucomicrobiota
TTC
Glu
>WENV183493476
OMGJ01000127
293069
Verrucomicrobiota
CTT
Lys
>WENV183493449
OMGJ01000064
406336
Verrucomicrobiota
CCT
Arg
>WENV183493518
OMGJ01000234
406369
Verrucomicrobiota
CCG
Arg
>WENV183493612
OMGJ01000667
405940
Verrucomicrobiota
GGT
Thr
>WENV183493469
OMGJ01000114
406044
Verrucomicrobiota
CTG
Gln
>WENV183493482
OMGJ01000140
187556
Verrucomicrobiota
GGG
Pro
>WENV183493630
OMGJ01000732
406037
Verrucomicrobiota
GTG
His
>WENV183493715
OMGJ01001725
406360
Verrucomicrobiota
GAC
Val
>WENV183493742
OMGJ01002469
187548
Verrucomicrobiota
TCT
Arg
>WENV183493475
OMGJ01000127
406040
Verrucomicrobiota
CGT
Thr
>WENV183493463
OMGJ01000094
406039
Verrucomicrobiota
CAC
Val
>WENV183493697
OMGJ01001495
75458
Verrucomicrobiota
CAG
Leu
>WENV183493668
OMGJ01001132
406368
Verrucomicrobiota
TTG
Gln
>WENV183493527
OMGJ01000252
21159
Verrucomicrobiota
GGA
Ser
>WENV183493436
OMGJ01000040
101461
Verrucomicrobiota
GTA
Tyr
>WENV183493446
OMGJ01000060
293095
Verrucomicrobiota
TTT
Lys
>WENV183493705
OMGJ01001640
187561
Verrucomicrobiota
CGG
Pro
>WENV183493587
OMGJ01000549
406342
Verrucomicrobiota
CAT
Met
>WENV183493560
OMGJ01000391
406351
Verrucomicrobiota
GTT
Asn
>WENV183493596
OMGJ01000609
303305
Verrucomicrobiota
GGC
Ala
>WENV183493591
OMGJ01000593
507474
Verrucomicrobiota
TCC
Gly
>WENV183493564
OMGJ01000420
406346
Verrucomicrobiota
TAC
Val
>WENV183493685
OMGJ01001420
8938
Verrucomicrobiota
GCT
Ser
>WENV183493605
OMGJ01000635
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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