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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183497959
OMGO01000055
406043
Verrucomicrobiota
GCA
Cys
>WENV183497932
OMGO01000036
293125
Verrucomicrobiota
GAA
Phe
>WENV183498011
OMGO01000094
406350
Verrucomicrobiota
TGT
Thr
>WENV183497875
OMGO01000003
148006
Verrucomicrobiota
CAA
Leu
>WENV183497957
OMGO01000055
293105
Verrucomicrobiota
CAT
Met
>WENV183497874
OMGO01000003
405901
Verrucomicrobiota
GCC
Gly
>WENV183497930
OMGO01000036
483642
Verrucomicrobiota
CCC
Gly
>WENV183497980
OMGO01000074
229220
Verrucomicrobiota
CAT
Met
>WENV183497899
OMGO01000014
157427
Verrucomicrobiota
GTC
Asp
>WENV183498041
OMGO01000127
157427
Verrucomicrobiota
GTC
Asp
>WENV183498012
OMGO01000094
293079
Verrucomicrobiota
CGC
Ala
>WENV183497876
OMGO01000003
120352
Verrucomicrobiota
TAG
Leu
>WENV183497931
OMGO01000036
489412
Verrucomicrobiota
TCC
Gly
>WENV183498135
OMGO01000425
293069
Verrucomicrobiota
CTT
Lys
>WENV183497877
OMGO01000003
406336
Verrucomicrobiota
CCT
Arg
>WENV183498024
OMGO01000109
406369
Verrucomicrobiota
CCG
Arg
>WENV183497937
OMGO01000039
405940
Verrucomicrobiota
GGT
Thr
>WENV183497908
OMGO01000018
406044
Verrucomicrobiota
CTG
Gln
>WENV183497929
OMGO01000036
187556
Verrucomicrobiota
GGG
Pro
>WENV183497956
OMGO01000055
406037
Verrucomicrobiota
GTG
His
>WENV183497923
OMGO01000032
406360
Verrucomicrobiota
GAC
Val
>WENV183498085
OMGO01000197
187548
Verrucomicrobiota
TCT
Arg
>WENV183498134
OMGO01000425
406040
Verrucomicrobiota
CGT
Thr
>WENV183497924
OMGO01000032
57652
Verrucomicrobiota
TGA
Ser
>WENV183498103
OMGO01000232
406039
Verrucomicrobiota
CAC
Val
>WENV183497906
OMGO01000018
406368
Verrucomicrobiota
TTG
Gln
>WENV183497974
OMGO01000069
101461
Verrucomicrobiota
GTA
Tyr
>WENV183497901
OMGO01000014
293095
Verrucomicrobiota
TTT
Lys
>WENV183498142
OMGO01000489
187561
Verrucomicrobiota
CGG
Pro
>WENV183497878
OMGO01000003
406342
Verrucomicrobiota
CAT
Met
>WENV183497973
OMGO01000069
406351
Verrucomicrobiota
GTT
Asn
>WENV183497907
OMGO01000018
303305
Verrucomicrobiota
GGC
Ala
>WENV183498020
OMGO01000106
8938
Verrucomicrobiota
GCT
Ser
>WENV183497933
OMGO01000036
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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