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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183499567
OMGQ01000045
406043
Verrucomicrobiota
GCA
Cys
>WENV183499521
OMGQ01000024
293125
Verrucomicrobiota
GAA
Phe
>WENV183499721
OMGQ01000165
406350
Verrucomicrobiota
TGT
Thr
>WENV183499513
OMGQ01000019
148006
Verrucomicrobiota
CAA
Leu
>WENV183499565
OMGQ01000045
293105
Verrucomicrobiota
CAT
Met
>WENV183499908
OMGQ01000504
405901
Verrucomicrobiota
GCC
Gly
>WENV183499524
OMGQ01000024
483642
Verrucomicrobiota
CCC
Gly
>WENV183499680
OMGQ01000131
229220
Verrucomicrobiota
CAT
Met
>WENV183499698
OMGQ01000151
157427
Verrucomicrobiota
GTC
Asp
>WENV183499753
OMGQ01000213
157427
Verrucomicrobiota
GTC
Asp
>WENV183499722
OMGQ01000165
293079
Verrucomicrobiota
CGC
Ala
>WENV183499514
OMGQ01000019
120352
Verrucomicrobiota
TAG
Leu
>WENV183499520
OMGQ01000024
489412
Verrucomicrobiota
TCC
Gly
>WENV183499884
OMGQ01000443
293069
Verrucomicrobiota
CTT
Lys
>WENV183499512
OMGQ01000019
406336
Verrucomicrobiota
CCT
Arg
>WENV183499525
OMGQ01000024
406369
Verrucomicrobiota
CCG
Arg
>WENV183499552
OMGQ01000036
405940
Verrucomicrobiota
GGT
Thr
>WENV183499559
OMGQ01000043
406044
Verrucomicrobiota
CTG
Gln
>WENV183499523
OMGQ01000024
187556
Verrucomicrobiota
GGG
Pro
>WENV183499564
OMGQ01000045
406037
Verrucomicrobiota
GTG
His
>WENV183499587
OMGQ01000060
406360
Verrucomicrobiota
GAC
Val
>WENV183499578
OMGQ01000054
187548
Verrucomicrobiota
TCT
Arg
>WENV183499883
OMGQ01000443
406040
Verrucomicrobiota
CGT
Thr
>WENV183499588
OMGQ01000060
57652
Verrucomicrobiota
TGA
Ser
>WENV183499867
OMGQ01000390
406039
Verrucomicrobiota
CAC
Val
>WENV183499560
OMGQ01000043
406368
Verrucomicrobiota
TTG
Gln
>WENV183499673
OMGQ01000127
101461
Verrucomicrobiota
GTA
Tyr
>WENV183499577
OMGQ01000054
293095
Verrucomicrobiota
TTT
Lys
>WENV183499885
OMGQ01000443
187561
Verrucomicrobiota
CGG
Pro
>WENV183499720
OMGQ01000164
406342
Verrucomicrobiota
CAT
Met
>WENV183499672
OMGQ01000127
406351
Verrucomicrobiota
GTT
Asn
>WENV183499558
OMGQ01000043
303305
Verrucomicrobiota
GGC
Ala
>WENV183499730
OMGQ01000185
8938
Verrucomicrobiota
GCT
Ser
>WENV183499522
OMGQ01000024
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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