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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183500627
OMGR01000010
406043
Verrucomicrobiota
GCA
Cys
>WENV183500657
OMGR01000040
293125
Verrucomicrobiota
GAA
Phe
>WENV183500629
OMGR01000010
406350
Verrucomicrobiota
TGT
Thr
>WENV183500791
OMGR01000355
148006
Verrucomicrobiota
CAA
Leu
>WENV183500626
OMGR01000010
101600
Verrucomicrobiota
AAG
Leu
>WENV183500852
OMGR01000651
293105
Verrucomicrobiota
CAT
Met
>WENV183500619
OMGR01000004
405901
Verrucomicrobiota
GCC
Gly
>WENV183500683
OMGR01000074
405901
Verrucomicrobiota
GCC
Gly
>WENV183500662
OMGR01000043
483642
Verrucomicrobiota
CCC
Gly
>WENV183500724
OMGR01000161
229220
Verrucomicrobiota
CAT
Met
>WENV183500930
OMGR01001447
8960
Verrucomicrobiota
CGA
Ser
>WENV183500826
OMGR01000500
101463
Verrucomicrobiota
TAA
Leu
>WENV183500675
OMGR01000056
157427
Verrucomicrobiota
GTC
Asp
>WENV183500770
OMGR01000257
157427
Verrucomicrobiota
GTC
Asp
>WENV183500630
OMGR01000010
293079
Verrucomicrobiota
CGC
Ala
>WENV183500623
OMGR01000006
120352
Verrucomicrobiota
TAG
Leu
>WENV183500827
OMGR01000500
292636
Verrucomicrobiota
>WENV183500661
OMGR01000043
489412
Verrucomicrobiota
TCC
Gly
>WENV183500628
OMGR01000010
298263
Verrucomicrobiota
TTC
Glu
>WENV183500850
OMGR01000651
298263
Verrucomicrobiota
TTC
Glu
>WENV183500725
OMGR01000163
293069
Verrucomicrobiota
CTT
Lys
>WENV183500819
OMGR01000472
293069
Verrucomicrobiota
CTT
Lys
>WENV183500622
OMGR01000006
406336
Verrucomicrobiota
CCT
Arg
>WENV183500663
OMGR01000043
406369
Verrucomicrobiota
CCG
Arg
>WENV183500677
OMGR01000062
405940
Verrucomicrobiota
GGT
Thr
>WENV183500673
OMGR01000056
406044
Verrucomicrobiota
CTG
Gln
>WENV183500659
OMGR01000040
187556
Verrucomicrobiota
GGG
Pro
>WENV183500851
OMGR01000651
406037
Verrucomicrobiota
GTG
His
>WENV183500674
OMGR01000056
406360
Verrucomicrobiota
GAC
Val
>WENV183500634
OMGR01000013
187548
Verrucomicrobiota
TCT
Arg
>WENV183500818
OMGR01000472
406040
Verrucomicrobiota
CGT
Thr
>WENV183500682
OMGR01000074
57652
Verrucomicrobiota
TGA
Ser
>WENV183500618
OMGR01000004
406039
Verrucomicrobiota
CAC
Val
>WENV183500831
OMGR01000518
75458
Verrucomicrobiota
CAG
Leu
>WENV183500620
OMGR01000004
406368
Verrucomicrobiota
TTG
Gln
>WENV183500746
OMGR01000208
21159
Verrucomicrobiota
GGA
Ser
>WENV183500625
OMGR01000007
101461
Verrucomicrobiota
GTA
Tyr
>WENV183500621
OMGR01000005
293095
Verrucomicrobiota
TTT
Lys
>WENV183500820
OMGR01000472
187561
Verrucomicrobiota
CGG
Pro
>WENV183500681
OMGR01000074
406342
Verrucomicrobiota
CAT
Met
>WENV183500624
OMGR01000007
406351
Verrucomicrobiota
GTT
Asn
>WENV183500617
OMGR01000004
303305
Verrucomicrobiota
GGC
Ala
>WENV183500801
OMGR01000392
406346
Verrucomicrobiota
TAC
Val
>WENV183500828
OMGR01000500
8938
Verrucomicrobiota
GCT
Ser
>WENV183500658
OMGR01000040
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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