This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183517180
OMNP01000036
204388
Verrucomicrobiota
CAT
Met
>WENV183517449
OMNP01001371
406043
Verrucomicrobiota
GCA
Cys
>WENV183517249
OMNP01000110
293125
Verrucomicrobiota
GAA
Phe
>WENV183517140
OMNP01000007
406350
Verrucomicrobiota
TGT
Thr
>WENV183517188
OMNP01000041
148006
Verrucomicrobiota
CAA
Leu
>WENV183517251
OMNP01000113
101600
Verrucomicrobiota
AAG
Leu
>WENV183517397
OMNP01000664
293105
Verrucomicrobiota
CAT
Met
>WENV183517340
OMNP01000332
405901
Verrucomicrobiota
GCC
Gly
>WENV183517247
OMNP01000110
483642
Verrucomicrobiota
CCC
Gly
>WENV183517148
OMNP01000011
8960
Verrucomicrobiota
CGA
Ser
>WENV183517189
OMNP01000041
101463
Verrucomicrobiota
TAA
Leu
>WENV183517244
OMNP01000105
157427
Verrucomicrobiota
GTC
Asp
>WENV183517141
OMNP01000007
293079
Verrucomicrobiota
CGC
Ala
>WENV183517132
OMNP01000003
120352
Verrucomicrobiota
TAG
Leu
>WENV183517190
OMNP01000041
292636
Verrucomicrobiota
>WENV183517248
OMNP01000110
489412
Verrucomicrobiota
TCC
Gly
>WENV183517138
OMNP01000007
298263
Verrucomicrobiota
TTC
Glu
>WENV183517139
OMNP01000007
298263
Verrucomicrobiota
TTC
Glu
>WENV183517395
OMNP01000664
298263
Verrucomicrobiota
TTC
Glu
>WENV183517161
OMNP01000020
293069
Verrucomicrobiota
CTT
Lys
>WENV183517133
OMNP01000003
406336
Verrucomicrobiota
CCT
Arg
>WENV183517254
OMNP01000119
406369
Verrucomicrobiota
CCG
Arg
>WENV183517171
OMNP01000023
405940
Verrucomicrobiota
GGT
Thr
>WENV183517178
OMNP01000032
406044
Verrucomicrobiota
CTG
Gln
>WENV183517238
OMNP01000096
187556
Verrucomicrobiota
GGG
Pro
>WENV183517396
OMNP01000664
406037
Verrucomicrobiota
GTG
His
>WENV183517252
OMNP01000116
406360
Verrucomicrobiota
GAC
Val
>WENV183517128
OMNP01000001
187548
Verrucomicrobiota
TCT
Arg
>WENV183517160
OMNP01000020
406040
Verrucomicrobiota
CGT
Thr
>WENV183517300
OMNP01000197
57652
Verrucomicrobiota
TGA
Ser
>WENV183517134
OMNP01000004
406039
Verrucomicrobiota
CAC
Val
>WENV183517257
OMNP01000127
75458
Verrucomicrobiota
CAG
Leu
>WENV183517177
OMNP01000032
406368
Verrucomicrobiota
TTG
Gln
>WENV183517212
OMNP01000056
21159
Verrucomicrobiota
GGA
Ser
>WENV183517158
OMNP01000017
101461
Verrucomicrobiota
GTA
Tyr
>WENV183517228
OMNP01000081
293095
Verrucomicrobiota
TTT
Lys
>WENV183517352
OMNP01000384
187561
Verrucomicrobiota
CGG
Pro
>WENV183517256
OMNP01000125
406342
Verrucomicrobiota
CAT
Met
>WENV183517157
OMNP01000017
406351
Verrucomicrobiota
GTT
Asn
>WENV183517304
OMNP01000218
303305
Verrucomicrobiota
GGC
Ala
>WENV183517144
OMNP01000009
406346
Verrucomicrobiota
TAC
Val
>WENV183517191
OMNP01000041
8938
Verrucomicrobiota
GCT
Ser
>WENV183517250
OMNP01000110
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK