This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183518972
OMNT01000033
406043
Verrucomicrobiota
GCA
Cys
>WENV183518909
OMNT01000014
293125
Verrucomicrobiota
GAA
Phe
>WENV183518974
OMNT01000033
406350
Verrucomicrobiota
TGT
Thr
>WENV183518879
OMNT01000005
148006
Verrucomicrobiota
CAA
Leu
>WENV183518971
OMNT01000033
101600
Verrucomicrobiota
AAG
Leu
>WENV183518970
OMNT01000033
293105
Verrucomicrobiota
CAT
Met
>WENV183518967
OMNT01000033
405901
Verrucomicrobiota
GCC
Gly
>WENV183519332
OMNT01000411
405901
Verrucomicrobiota
GCC
Gly
>WENV183518906
OMNT01000014
483642
Verrucomicrobiota
CCC
Gly
>WENV183519060
OMNT01000095
8960
Verrucomicrobiota
CGA
Ser
>WENV183518882
OMNT01000005
101463
Verrucomicrobiota
TAA
Leu
>WENV183518869
OMNT01000003
157427
Verrucomicrobiota
GTC
Asp
>WENV183519143
OMNT01000149
157427
Verrucomicrobiota
GTC
Asp
>WENV183519272
OMNT01000312
293079
Verrucomicrobiota
CGC
Ala
>WENV183518880
OMNT01000005
120352
Verrucomicrobiota
TAG
Leu
>WENV183518883
OMNT01000005
292636
Verrucomicrobiota
>WENV183519194
OMNT01000210
293069
Verrucomicrobiota
CTT
Lys
>WENV183518881
OMNT01000005
406336
Verrucomicrobiota
CCT
Arg
>WENV183518907
OMNT01000014
406369
Verrucomicrobiota
CCG
Arg
>WENV183519132
OMNT01000140
405940
Verrucomicrobiota
GGT
Thr
>WENV183518873
OMNT01000003
406044
Verrucomicrobiota
CTG
Gln
>WENV183518905
OMNT01000014
187556
Verrucomicrobiota
GGG
Pro
>WENV183518969
OMNT01000033
406037
Verrucomicrobiota
GTG
His
>WENV183518874
OMNT01000003
406360
Verrucomicrobiota
GAC
Val
>WENV183518885
OMNT01000006
187548
Verrucomicrobiota
TCT
Arg
>WENV183519193
OMNT01000210
406040
Verrucomicrobiota
CGT
Thr
>WENV183519439
OMNT01000760
57652
Verrucomicrobiota
TGA
Ser
>WENV183518871
OMNT01000003
406039
Verrucomicrobiota
CAC
Val
>WENV183519210
OMNT01000233
75458
Verrucomicrobiota
CAG
Leu
>WENV183518872
OMNT01000003
406368
Verrucomicrobiota
TTG
Gln
>WENV183519142
OMNT01000149
21159
Verrucomicrobiota
GGA
Ser
>WENV183518961
OMNT01000026
101461
Verrucomicrobiota
GTA
Tyr
>WENV183519434
OMNT01000736
293095
Verrucomicrobiota
TTT
Lys
>WENV183519195
OMNT01000210
187561
Verrucomicrobiota
CGG
Pro
>WENV183519443
OMNT01000764
406342
Verrucomicrobiota
CAT
Met
>WENV183518960
OMNT01000026
406351
Verrucomicrobiota
GTT
Asn
>WENV183518868
OMNT01000003
406346
Verrucomicrobiota
TAC
Val
>WENV183518884
OMNT01000005
8938
Verrucomicrobiota
GCT
Ser
>WENV183518910
OMNT01000014
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK