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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183520963
OMNU01000120
406043
Verrucomicrobiota
GCA
Cys
>WENV183521364
OMNU01004236
293125
Verrucomicrobiota
GAA
Phe
>WENV183521495
OMNU01008444
406350
Verrucomicrobiota
TGT
Thr
>WENV183521418
OMNU01005965
148006
Verrucomicrobiota
CAA
Leu
>WENV183521029
OMNU01000362
101600
Verrucomicrobiota
AAG
Leu
>WENV183521286
OMNU01002815
405901
Verrucomicrobiota
GCC
Gly
>WENV183521129
OMNU01000780
483642
Verrucomicrobiota
CCC
Gly
>WENV183521423
OMNU01006069
8960
Verrucomicrobiota
CGA
Ser
>WENV183521561
OMNU01011588
101463
Verrucomicrobiota
TAA
Leu
>WENV183521155
OMNU01000967
157427
Verrucomicrobiota
GTC
Asp
>WENV183521186
OMNU01001297
293079
Verrucomicrobiota
CGC
Ala
>WENV183521339
OMNU01003863
120352
Verrucomicrobiota
TAG
Leu
>WENV183521727
OMNU01022286
292636
Verrucomicrobiota
>WENV183521208
OMNU01001615
293069
Verrucomicrobiota
CTT
Lys
>WENV183520910
OMNU01000019
406336
Verrucomicrobiota
CCT
Arg
>WENV183520916
OMNU01000034
406369
Verrucomicrobiota
CCG
Arg
>WENV183520949
OMNU01000087
405940
Verrucomicrobiota
GGT
Thr
>WENV183521272
OMNU01002424
406044
Verrucomicrobiota
CTG
Gln
>WENV183521100
OMNU01000623
187556
Verrucomicrobiota
GGG
Pro
>WENV183521473
OMNU01007773
406037
Verrucomicrobiota
GTG
His
>WENV183521046
OMNU01000450
406360
Verrucomicrobiota
GAC
Val
>WENV183521009
OMNU01000273
187548
Verrucomicrobiota
TCT
Arg
>WENV183521207
OMNU01001615
406040
Verrucomicrobiota
CGT
Thr
>WENV183521241
OMNU01002069
57652
Verrucomicrobiota
TGA
Ser
>WENV183521223
OMNU01001802
406039
Verrucomicrobiota
CAC
Val
>WENV183521156
OMNU01000970
75458
Verrucomicrobiota
CAG
Leu
>WENV183521170
OMNU01001097
406368
Verrucomicrobiota
TTG
Gln
>WENV183520990
OMNU01000196
101461
Verrucomicrobiota
GTA
Tyr
>WENV183520986
OMNU01000176
187561
Verrucomicrobiota
CGG
Pro
>WENV183521192
OMNU01001417
406342
Verrucomicrobiota
CAT
Met
>WENV183521324
OMNU01003561
406351
Verrucomicrobiota
GTT
Asn
>WENV183521372
OMNU01004486
406346
Verrucomicrobiota
TAC
Val
>WENV183521365
OMNU01004236
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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