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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183562180
OOBV01057555
148006
Verrucomicrobiota
CAA
Leu
>WENV183562057
OOBV01025691
405901
Verrucomicrobiota
GCC
Gly
>WENV183561863
OOBV01006680
8960
Verrucomicrobiota
CGA
Ser
>WENV183561926
OOBV01009279
292636
Verrucomicrobiota
>WENV183562068
OOBV01027569
293069
Verrucomicrobiota
CTT
Lys
>WENV183562195
OOBV01065225
405940
Verrucomicrobiota
GGT
Thr
>WENV183562097
OOBV01038518
406037
Verrucomicrobiota
GTG
His
>WENV183562067
OOBV01027569
406040
Verrucomicrobiota
CGT
Thr
>WENV183562117
OOBV01042586
57652
Verrucomicrobiota
TGA
Ser
>WENV183562154
OOBV01049131
75458
Verrucomicrobiota
CAG
Leu
>WENV183561970
OOBV01013541
406368
Verrucomicrobiota
TTG
Gln
>WENV183561881
OOBV01008018
101461
Verrucomicrobiota
GTA
Tyr
>WENV183562016
OOBV01018065
406351
Verrucomicrobiota
GTT
Asn
>WENV183562024
OOBV01019645
406346
Verrucomicrobiota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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