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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV11102243
AGFT01135075
113111
Bacillota
AAG
Leu
>WENV170002171
AGFT01135075
113111
Bacillota
AAG
Leu
>WENV11102100
AGFT01076872
113515
Bacillota
CAG
Leu
>WENV170002028
AGFT01076872
113515
Bacillota
CAG
Leu
>WENV11102094
AGFT01074107
73266
Bacillota
AAG
Leu
>WENV170002022
AGFT01074107
73266
Bacillota
AAG
Leu
>WENV11101945
AGFT01017965
31101
Bacillota
CGA
Ser
>WENV170001873
AGFT01017965
31101
Bacillota
CGA
Ser
>WENV11102001
AGFT01042734
455688
Bacillota
GGT
Thr
>WENV170001929
AGFT01042734
455688
Bacillota
GGT
Thr
>WENV11101989
AGFT01038652
462713
Bacillota
GTG
His
>WENV170001917
AGFT01038652
462713
Bacillota
GTG
His
>WENV11101991
AGFT01038652
112952
Bacillota
CAA
Leu
>WENV170001919
AGFT01038652
112952
Bacillota
CAA
Leu
>WENV11102135
AGFT01099631
456059
Bacillota
CTT
Lys
>WENV170002063
AGFT01099631
456059
Bacillota
CTT
Lys
>WENV11102056
AGFT01059085
281164
Bacillota
CAT
Met
>WENV170001984
AGFT01059085
281164
Bacillota
CAT
Met
>WENV11101988
AGFT01038652
782116
Bacillota
CCA
Trp
>WENV170001916
AGFT01038652
782116
Bacillota
CCA
Trp
>WENV11102133
AGFT01096366
274535
Bacillota
TCT
Arg
>WENV170002061
AGFT01096366
274535
Bacillota
TCT
Arg
>WENV11102238
AGFT01134279
181948
Bacillota
CAG
Leu
>WENV170002166
AGFT01134279
181948
Bacillota
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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