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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170012505
ASRK01010365
463603
Gammaproteobacteria
TAC
Val
>WENV170012456
ASRK01000539
282116
Gammaproteobacteria
GAC
Val
>WENV170012460
ASRK01000663
272970
Gammaproteobacteria
CCG
Arg
>WENV170012459
ASRK01000584
456511
Gammaproteobacteria
GAA
Phe
>WENV170012470
ASRK01001777
112307
Gammaproteobacteria
CAA
Leu
>WENV170012494
ASRK01008192
273702
Gammaproteobacteria
GAT
Ile
>WENV170012464
ASRK01000972
452881
Gammaproteobacteria
TGT
Thr
>WENV170012492
ASRK01007291
270929
Gammaproteobacteria
GAT
Ile
>WENV170012504
ASRK01010365
463602
Gammaproteobacteria
TTT
Lys
>WENV170012499
ASRK01009374
270823
Gammaproteobacteria
TGG
Pro
>WENV170012486
ASRK01003938
451920
Gammaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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