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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170015643
AZII01000740
507193
Gammaproteobacteria
GAA
Phe
>WENV170015786
AZII01009150
507193
Gammaproteobacteria
GAA
Phe
>WENV170015778
AZII01008797
511602
Gammaproteobacteria
TTC
Glu
>WENV170015789
AZII01009515
511602
Gammaproteobacteria
TTC
Glu
>WENV170015678
AZII01002590
311354
Gammaproteobacteria
GAC
Val
>WENV170015638
AZII01000422
341421
Gammaproteobacteria
TGG
Pro
>WENV170015675
AZII01002545
547925
Gammaproteobacteria
TAC
Val
>WENV170015770
AZII01008292
128531
Gammaproteobacteria
CAG
Leu
>WENV170015636
AZII01000359
311562
Gammaproteobacteria
GAC
Val
>WENV170015689
AZII01003297
311562
Gammaproteobacteria
GAC
Val
>WENV170015782
AZII01009023
311562
Gammaproteobacteria
GAC
Val
>WENV170015796
AZII01009949
311562
Gammaproteobacteria
GAC
Val
>WENV170015677
AZII01002546
513280
Gammaproteobacteria
GGC
Ala
>WENV170015633
AZII01000253
543644
Gammaproteobacteria
TGT
Thr
>WENV170015724
AZII01005223
872053
Gammaproteobacteria
GCA
Cys
>WENV170015761
AZII01007065
208302
Gammaproteobacteria
GAG
Leu
>WENV170015644
AZII01000783
871754
Gammaproteobacteria
GCA
Cys
>WENV170015700
AZII01003518
310413
Gammaproteobacteria
TCT
Arg
>WENV170015671
AZII01002370
513695
Gammaproteobacteria
CCA
Trp
>WENV170015765
AZII01007414
309058
Gammaproteobacteria
CAT
Met
>WENV170015679
AZII01002620
534446
Gammaproteobacteria
GTG
His
>WENV170015691
AZII01003361
872117
Gammaproteobacteria
GCA
Cys
>WENV170015795
AZII01009827
99992
Gammaproteobacteria
GGA
Ser
>WENV170015752
AZII01006450
513099
Gammaproteobacteria
CCA
Trp
>WENV170015637
AZII01000422
543701
Gammaproteobacteria
GTT
Asn
>WENV170015701
AZII01003820
543701
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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