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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170016083
AZIJ01012125
309882
Bacteroidota
TCT
Arg
>WENV170015979
AZIJ01006057
320242
Bacteroidota
GTG
His
>WENV170016201
AZIJ01016097
518130
Bacteroidota
TTG
Gln
>WENV170015992
AZIJ01006456
308538
Bacteroidota
GTT
Asn
>WENV170016079
AZIJ01012112
741323
Bacteroidota
GGT
Thr
>WENV170016298
AZIJ01022009
208934
Bacteroidota
CAA
Leu
>WENV170016300
AZIJ01022391
309698
Bacteroidota
GGC
Ala
>WENV170015838
AZIJ01000803
272202
Bacteroidota
TGG
Pro
>WENV170016012
AZIJ01007816
509090
Bacteroidota
GCC
Gly
>WENV170016155
AZIJ01013286
36018
Bacteroidota
GGA
Ser
>WENV170015837
AZIJ01000803
132107
Bacteroidota
GCT
Ser
>WENV170015852
AZIJ01001535
734200
Bacteroidota
TTC
Glu
>WENV170015912
AZIJ01003931
338298
Bacteroidota
GGG
Pro
>WENV170015880
AZIJ01002696
131469
Bacteroidota
TAA
Leu
>WENV170016163
AZIJ01013754
523994
Bacteroidota
TTT
Lys
>WENV170016082
AZIJ01012125
272547
Bacteroidota
TGG
Pro
>WENV170016080
AZIJ01012112
512002
Bacteroidota
CCA
Trp
>WENV170016188
AZIJ01015232
512002
Bacteroidota
CCA
Trp
>WENV170015840
AZIJ01000822
327687
Bacteroidota
>WENV170015901
AZIJ01003423
272701
Bacteroidota
GAC
Val
>WENV170016176
AZIJ01014507
272701
Bacteroidota
GAC
Val
>WENV170016047
AZIJ01009984
510201
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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