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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170016635
AZMM01018826
733221
Bacillota
GTT
Asn
>WENV170016623
AZMM01018623
743475
Bacillota
GTT
Asn
>WENV170016605
AZMM01011638
308994
Bacillota
CCT
Arg
>WENV170016541
AZMM01000155
511177
Bacillota
GAA
Phe
>WENV170016588
AZMM01003512
511177
Bacillota
GAA
Phe
>WENV170016607
AZMM01012627
511184
Bacillota
GGT
Thr
>WENV170016636
AZMM01018827
733219
Bacillota
GTT
Asn
>WENV170016559
AZMM01000874
512877
Bacillota
GTT
Asn
>WENV170016614
AZMM01018329
732650
Bacillota
>WENV170016646
AZMM01018927
35960
Bacillota
TGA
Ser
>WENV170016562
AZMM01000930
871950
Bacillota
TCC
Gly
>WENV170016567
AZMM01001025
83592
Bacillota
TAA
Leu
>WENV170016634
AZMM01018826
83592
Bacillota
TAA
Leu
>WENV170016608
AZMM01012627
308648
Bacillota
CAT
Met
>WENV170016561
AZMM01000930
308649
Bacillota
TGG
Pro
>WENV170016637
AZMM01018827
247172
Bacillota
GTA
Tyr
>WENV170016640
AZMM01018827
247172
Bacillota
GTA
Tyr
>WENV170016643
AZMM01018827
247172
Bacillota
GTA
Tyr
>WENV170016542
AZMM01000155
174577
Bacillota
GAG
Leu
>WENV170016589
AZMM01003512
174577
Bacillota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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