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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
103 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170067975
CDZO01030727
451336
Bacillota
GAA
Phe
>WENV170068244
CDZO01041004
451336
Bacillota
GAA
Phe
>WENV170067445
CDZO01012336
275710
Bacillota
CCG
Arg
>WENV170068001
CDZO01032084
275710
Bacillota
CCG
Arg
>WENV170067208
CDZO01004257
270416
Bacillota
CAC
Val
>WENV170067237
CDZO01005469
270416
Bacillota
CAC
Val
>WENV170067315
CDZO01008085
455828
Bacillota
TAC
Val
>WENV170067693
CDZO01022371
455828
Bacillota
TAC
Val
>WENV170067884
CDZO01027810
455828
Bacillota
TAC
Val
>WENV170068043
CDZO01033313
455828
Bacillota
TAC
Val
>WENV170068202
CDZO01039132
455828
Bacillota
TAC
Val
>WENV170067435
CDZO01012274
653346
Bacillota
TTC
Glu
>WENV170067514
CDZO01015118
653346
Bacillota
TTC
Glu
>WENV170067775
CDZO01025444
86860
Bacillota
TGA
Ser
>WENV170067275
CDZO01006728
779387
Bacillota
TTG
Gln
>WENV170067774
CDZO01025374
465106
Bacillota
TGT
Thr
>WENV170067786
CDZO01025571
465106
Bacillota
TGT
Thr
>WENV170068231
CDZO01040428
285831
Bacillota
GTC
Asp
>WENV170067374
CDZO01010312
466790
Bacillota
CGG
Pro
>WENV170067363
CDZO01009797
460662
Bacillota
GCC
Gly
>WENV170067325
CDZO01008094
659884
Bacillota
CTG
Gln
>WENV170067326
CDZO01008094
659884
Bacillota
CTG
Gln
>WENV170067153
CDZO01002498
270426
Bacillota
GAT
Ile
>WENV170067241
CDZO01005492
451367
Bacillota
TAC
Val
>WENV170067302
CDZO01007751
451355
Bacillota
GAC
Val
>WENV170067502
CDZO01014367
451355
Bacillota
GAC
Val
>WENV170068242
CDZO01041004
451377
Bacillota
TAC
Val
>WENV170067334
CDZO01008383
279224
Bacillota
GAT
Ile
>WENV170067637
CDZO01020126
468336
Bacillota
GCC
Gly
>WENV170067828
CDZO01026339
112978
Bacillota
AAG
Leu
>WENV170067913
CDZO01028487
112978
Bacillota
AAG
Leu
>WENV170068216
CDZO01039780
112978
Bacillota
AAG
Leu
>WENV170067256
CDZO01006052
661851
Bacillota
GCA
Cys
>WENV170067648
CDZO01020395
72851
Bacillota
TGA
Ser
>WENV170067459
CDZO01013258
270438
Bacillota
TCT
Arg
>WENV170068005
CDZO01032277
451352
Bacillota
GGT
Thr
>WENV170068007
CDZO01032277
451352
Bacillota
GGT
Thr
>WENV170068061
CDZO01034046
451352
Bacillota
GGT
Thr
>WENV170068063
CDZO01034046
451352
Bacillota
GGT
Thr
>WENV170067152
CDZO01002498
467963
Bacillota
TGC
Ala
>WENV170067310
CDZO01008085
455831
Bacillota
GTT
Asn
>WENV170067630
CDZO01019753
455831
Bacillota
GTT
Asn
>WENV170067421
CDZO01011728
112239
Bacillota
CAG
Leu
>WENV170067454
CDZO01012672
112239
Bacillota
CAG
Leu
>WENV170067744
CDZO01023537
112239
Bacillota
CAG
Leu
>WENV170067789
CDZO01025573
451398
Bacillota
TGC
Ala
>WENV170067246
CDZO01005811
88702
Bacillota
CAG
Leu
>WENV170067247
CDZO01005811
88702
Bacillota
CAG
Leu
>WENV170067273
CDZO01006534
88702
Bacillota
CAG
Leu
>WENV170067413
CDZO01011664
465093
Bacillota
GCC
Gly
>WENV170067497
CDZO01014149
465093
Bacillota
GCC
Gly
>WENV170067114
CDZO01001181
653349
Bacillota
GCC
Gly
>WENV170067141
CDZO01002009
653349
Bacillota
GCC
Gly
>WENV170067653
CDZO01020747
653349
Bacillota
GCC
Gly
>WENV170067770
CDZO01025195
653349
Bacillota
GCC
Gly
>WENV170068040
CDZO01033047
653349
Bacillota
GCC
Gly
>WENV170067214
CDZO01004777
779389
Bacillota
TCC
Gly
>WENV170067738
CDZO01023422
779389
Bacillota
TCC
Gly
>WENV170067254
CDZO01006052
284668
Bacillota
GTC
Asp
>WENV170067977
CDZO01030727
284668
Bacillota
GTC
Asp
>WENV170068006
CDZO01032277
284668
Bacillota
GTC
Asp
>WENV170068008
CDZO01032277
284668
Bacillota
GTC
Asp
>WENV170068060
CDZO01034046
284668
Bacillota
GTC
Asp
>WENV170068062
CDZO01034046
284668
Bacillota
GTC
Asp
>WENV170068243
CDZO01041004
284668
Bacillota
GTC
Asp
>WENV170067215
CDZO01004777
274799
Bacillota
TCT
Arg
>WENV170067448
CDZO01012589
653398
Bacillota
CTC
Glu
>WENV170067891
CDZO01027813
653398
Bacillota
CTC
Glu
>WENV170067988
CDZO01031065
779385
Bacillota
CTG
Gln
>WENV170067373
CDZO01010312
779385
Bacillota
CTG
Gln
>WENV170067563
CDZO01016639
779385
Bacillota
CTG
Gln
>WENV170067886
CDZO01027810
270518
Bacillota
CAT
Met
>WENV170067434
CDZO01012274
270546
Bacillota
CAT
Met
>WENV170067513
CDZO01015118
270546
Bacillota
CAT
Met
>WENV170067107
CDZO01000804
20504
Bacillota
GGA
Ser
>WENV170067205
CDZO01004190
20504
Bacillota
GGA
Ser
>WENV170068064
CDZO01034046
451384
Bacillota
TGG
Pro
>WENV170068095
CDZO01034962
451384
Bacillota
TGG
Pro
>WENV170067209
CDZO01004764
467075
Bacillota
TGC
Ala
>WENV170067489
CDZO01013900
466773
Bacillota
GGC
Ala
>WENV170067311
CDZO01008085
653354
Bacillota
TTC
Glu
>WENV170067401
CDZO01011232
451375
Bacillota
GGC
Ala
>WENV170067728
CDZO01023355
270447
Bacillota
GTT
Asn
>WENV170067933
CDZO01029386
270447
Bacillota
GTT
Asn
>WENV170067727
CDZO01023355
653369
Bacillota
CTC
Glu
>WENV170067834
CDZO01026581
270399
Bacillota
GAT
Ile
>WENV170067253
CDZO01006052
451376
Bacillota
GCC
Gly
>WENV170067255
CDZO01006052
451376
Bacillota
GCC
Gly
>WENV170067701
CDZO01022698
451376
Bacillota
GCC
Gly
>WENV170067976
CDZO01030727
451376
Bacillota
GCC
Gly
>WENV170068241
CDZO01041004
451376
Bacillota
GCC
Gly
>WENV170068245
CDZO01041004
451376
Bacillota
GCC
Gly
>WENV170067833
CDZO01026581
451344
Bacillota
TGC
Ala
>WENV170067762
CDZO01024916
457194
Bacillota
TAC
Val
>WENV170067914
CDZO01028488
457194
Bacillota
TAC
Val
>WENV170067414
CDZO01011666
653347
Bacillota
TGT
Thr
>WENV170067145
CDZO01002244
270405
Bacillota
ACG
Arg
>WENV170067849
CDZO01026845
780500
Bacillota
CCA
Trp
>WENV170068009
CDZO01032404
454988
Bacillota
TGC
Ala
>WENV170067518
CDZO01015401
284784
Bacillota
GAT
Ile
>WENV170068085
CDZO01034562
284784
Bacillota
GAT
Ile
>WENV170067388
CDZO01010378
285826
Bacillota
CAT
Met
>WENV170067942
CDZO01029516
285826
Bacillota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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