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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170075506
CDZT01036919
451658
Actinomycetota
CCG
Arg
>WENV170075873
CDZT01049122
451405
Actinomycetota
CTC
Glu
>WENV170075595
CDZT01040703
270710
Actinomycetota
CAT
Met
>WENV170075815
CDZT01046747
451659
Actinomycetota
CCT
Arg
>WENV170076200
CDZT01059406
451655
Actinomycetota
CCA
Trp
>WENV170075121
CDZT01022630
451474
Actinomycetota
CAC
Val
>WENV170075480
CDZT01035795
451474
Actinomycetota
CAC
Val
>WENV170075509
CDZT01036919
451474
Actinomycetota
CAC
Val
>WENV170075508
CDZT01036919
653394
Actinomycetota
GAC
Val
>WENV170075046
CDZT01020005
779444
Actinomycetota
TTG
Gln
>WENV170074884
CDZT01012565
153702
Actinomycetota
CAG
Leu
>WENV170074702
CDZT01004956
45685
Actinomycetota
GCT
Ser
>WENV170075783
CDZT01045505
45685
Actinomycetota
GCT
Ser
>WENV170075883
CDZT01049657
217997
Actinomycetota
TAG
Leu
>WENV170075874
CDZT01049122
653368
Actinomycetota
CTG
Gln
>WENV170074580
CDZT01000635
270704
Actinomycetota
ACG
Arg
>WENV170074581
CDZT01000635
270704
Actinomycetota
ACG
Arg
>WENV170075721
CDZT01044139
270704
Actinomycetota
ACG
Arg
>WENV170075722
CDZT01044139
270704
Actinomycetota
ACG
Arg
>WENV170075723
CDZT01044139
270704
Actinomycetota
ACG
Arg
>WENV170075724
CDZT01044139
270704
Actinomycetota
ACG
Arg
>WENV170075725
CDZT01044139
270704
Actinomycetota
ACG
Arg
>WENV170075367
CDZT01031799
779447
Actinomycetota
GCA
Cys
>WENV170076082
CDZT01055047
86870
Actinomycetota
CGA
Ser
>WENV170076252
CDZT01061417
232508
Actinomycetota
TAA
Leu
>WENV170075230
CDZT01026637
270417
Actinomycetota
CAA
Leu
>WENV170074942
CDZT01016365
779446
Actinomycetota
CCC
Gly
>WENV170075884
CDZT01049657
451410
Actinomycetota
CGT
Thr
>WENV170074567
CDZT01000533
86861
Actinomycetota
TGA
Ser
>WENV170075767
CDZT01044815
270707
Actinomycetota
GAT
Ile
>WENV170076081
CDZT01055031
451469
Actinomycetota
GTG
His
>WENV170074984
CDZT01017993
30300
Actinomycetota
GAG
Leu
>WENV170075390
CDZT01032746
86885
Actinomycetota
GGA
Ser
>WENV170075882
CDZT01049657
451455
Actinomycetota
CGT
Thr
>WENV170075451
CDZT01034997
270498
Actinomycetota
TAC
Val
>WENV170076096
CDZT01055772
277197
Actinomycetota
CAT
Met
>WENV170075672
CDZT01042611
270520
Actinomycetota
CAT
Met
>WENV170075397
CDZT01032847
270708
Actinomycetota
CTT
Lys
>WENV170074755
CDZT01006845
270706
Actinomycetota
TGT
Thr
>WENV170075654
CDZT01041561
653480
Actinomycetota
TTC
Glu
>WENV170075042
CDZT01019690
270545
Actinomycetota
CAT
Met
>WENV170075768
CDZT01044815
451443
Actinomycetota
TGC
Ala
>WENV170075129
CDZT01022768
270711
Actinomycetota
GGG
Pro
>WENV170074783
CDZT01007857
270705
Actinomycetota
TCT
Arg
>WENV170076174
CDZT01058071
270468
Actinomycetota
GAT
Ile
>WENV170074626
CDZT01002887
466731
Actinomycetota
GGC
Ala
>WENV170074936
CDZT01016205
466731
Actinomycetota
GGC
Ala
>WENV170075893
CDZT01049758
451657
Actinomycetota
GGC
Ala
>WENV170075041
CDZT01019690
179947
Actinomycetota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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