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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170078944
CDZV01044419
451658
Actinomycetota
CCG
Arg
>WENV170078562
CDZV01030945
451405
Actinomycetota
CTC
Glu
>WENV170078177
CDZV01012502
270710
Actinomycetota
CAT
Met
>WENV170078440
CDZV01025570
270486
Actinomycetota
CGG
Pro
>WENV170078857
CDZV01042287
454262
Actinomycetota
GTT
Asn
>WENV170077897
CDZV01001402
466803
Actinomycetota
CTT
Lys
>WENV170078580
CDZV01031564
451655
Actinomycetota
CCA
Trp
>WENV170077942
CDZV01002472
466795
Actinomycetota
GCC
Gly
>WENV170078574
CDZV01031397
466795
Actinomycetota
GCC
Gly
>WENV170078112
CDZV01010212
779444
Actinomycetota
TTG
Gln
>WENV170079105
CDZV01051840
153702
Actinomycetota
CAG
Leu
>WENV170078540
CDZV01029542
217997
Actinomycetota
TAG
Leu
>WENV170078563
CDZV01030945
653368
Actinomycetota
CTG
Gln
>WENV170078100
CDZV01009742
270704
Actinomycetota
ACG
Arg
>WENV170078926
CDZV01044173
86870
Actinomycetota
CGA
Ser
>WENV170078345
CDZV01020464
232508
Actinomycetota
TAA
Leu
>WENV170078878
CDZV01042771
270417
Actinomycetota
CAA
Leu
>WENV170077991
CDZV01004542
779446
Actinomycetota
CCC
Gly
>WENV170078548
CDZV01030061
451410
Actinomycetota
CGT
Thr
>WENV170079190
CDZV01055421
86861
Actinomycetota
TGA
Ser
>WENV170078874
CDZV01042638
783181
Actinomycetota
CTG
Gln
>WENV170078634
CDZV01032999
270707
Actinomycetota
GAT
Ile
>WENV170078722
CDZV01036129
451469
Actinomycetota
GTG
His
>WENV170078499
CDZV01028152
30300
Actinomycetota
GAG
Leu
>WENV170078184
CDZV01013038
86885
Actinomycetota
GGA
Ser
>WENV170078539
CDZV01029542
451455
Actinomycetota
CGT
Thr
>WENV170078251
CDZV01015263
270498
Actinomycetota
TAC
Val
>WENV170078689
CDZV01035196
277197
Actinomycetota
CAT
Met
>WENV170079005
CDZV01047370
270520
Actinomycetota
CAT
Met
>WENV170078578
CDZV01031429
270708
Actinomycetota
CTT
Lys
>WENV170078853
CDZV01042231
270706
Actinomycetota
TGT
Thr
>WENV170078564
CDZV01030981
653480
Actinomycetota
TTC
Glu
>WENV170078219
CDZV01014408
270545
Actinomycetota
CAT
Met
>WENV170078635
CDZV01032999
451443
Actinomycetota
TGC
Ala
>WENV170078057
CDZV01007829
270705
Actinomycetota
TCT
Arg
>WENV170078575
CDZV01031401
270468
Actinomycetota
GAT
Ile
>WENV170078577
CDZV01031401
270468
Actinomycetota
GAT
Ile
>WENV170078021
CDZV01006385
466731
Actinomycetota
GGC
Ala
>WENV170078180
CDZV01012862
466731
Actinomycetota
GGC
Ala
>WENV170078480
CDZV01026939
451657
Actinomycetota
GGC
Ala
>WENV170078683
CDZV01035052
451657
Actinomycetota
GGC
Ala
>WENV170078218
CDZV01014408
179947
Actinomycetota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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