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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170098137
CEAN01000342
511207
Bacteroidota
CGT
Thr
>WENV170098441
CEAN01007420
99770
Bacteroidota
TAA
Leu
>WENV170098296
CEAN01004803
35781
Bacteroidota
GGA
Ser
>WENV170098513
CEAN01008604
35781
Bacteroidota
GGA
Ser
>WENV170098578
CEAN01010756
308672
Bacteroidota
GGC
Ala
>WENV170098557
CEAN01010304
53244
Bacteroidota
GCT
Ser
>WENV170098575
CEAN01010754
308706
Bacteroidota
GGC
Ala
>WENV170098512
CEAN01008604
308671
Bacteroidota
GTG
His
>WENV170098576
CEAN01010755
99769
Bacteroidota
TGA
Ser
>WENV170098577
CEAN01010755
99769
Bacteroidota
TGA
Ser
>WENV170098488
CEAN01008195
308670
Bacteroidota
GTT
Asn
>WENV170098600
CEAN01011150
308670
Bacteroidota
GTT
Asn
>WENV170098601
CEAN01011150
308670
Bacteroidota
GTT
Asn
>WENV170098529
CEAN01009027
510261
Bacteroidota
>WENV170098380
CEAN01006218
35784
Bacteroidota
GGA
Ser
>WENV170098360
CEAN01005868
272450
Bacteroidota
TGG
Pro
>WENV170098221
CEAN01002061
307812
Bacteroidota
GTG
His
>WENV170098312
CEAN01005126
308675
Bacteroidota
GGC
Ala
>WENV170098694
CEAN01013488
871962
Bacteroidota
CTG
Gln
>WENV170098393
CEAN01006496
872105
Bacteroidota
TTG
Gln
>WENV170098514
CEAN01008605
511206
Bacteroidota
CCC
Gly
>WENV170098596
CEAN01011093
513127
Bacteroidota
CTC
Glu
>WENV170098558
CEAN01010304
734283
Bacteroidota
CTC
Glu
>WENV170098159
CEAN01000991
204683
Bacteroidota
TAG
Leu
>WENV170098281
CEAN01004032
204683
Bacteroidota
TAG
Leu
>WENV170098443
CEAN01007489
204683
Bacteroidota
TAG
Leu
>WENV170098489
CEAN01008197
511224
Bacteroidota
CCC
Gly
>WENV170098241
CEAN01002807
272301
Bacteroidota
GGG
Pro
>WENV170098294
CEAN01004675
272301
Bacteroidota
GGG
Pro
>WENV170098481
CEAN01008021
272301
Bacteroidota
GGG
Pro
>WENV170098692
CEAN01013488
272301
Bacteroidota
GGG
Pro
>WENV170098266
CEAN01003150
308705
Bacteroidota
>WENV170098428
CEAN01007150
734621
Bacteroidota
CCT
Arg
>WENV170098683
CEAN01013200
734279
Bacteroidota
CCG
Arg
>WENV170098211
CEAN01002056
247086
Bacteroidota
CAG
Leu
>WENV170098503
CEAN01008587
247086
Bacteroidota
CAG
Leu
>WENV170098635
CEAN01012042
515279
Bacteroidota
CCC
Gly
>WENV170098429
CEAN01007154
307861
Bacteroidota
CAT
Met
>WENV170098293
CEAN01004675
871954
Bacteroidota
CTG
Gln
>WENV170098132
CEAN01000050
35974
Bacteroidota
GGA
Ser
>WENV170098346
CEAN01005458
745280
Bacteroidota
CCT
Arg
>WENV170098667
CEAN01012921
128394
Bacteroidota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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