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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
65 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170105473
CEBV01011239
451336
Bacillota
GAA
Phe
>WENV170105911
CEBV01026683
451336
Bacillota
GAA
Phe
>WENV170105898
CEBV01026308
275710
Bacillota
CCG
Arg
>WENV170106009
CEBV01031203
275710
Bacillota
CCG
Arg
>WENV170106442
CEBV01049721
275710
Bacillota
CCG
Arg
>WENV170105365
CEBV01006567
270416
Bacillota
CAC
Val
>WENV170105601
CEBV01015623
270416
Bacillota
CAC
Val
>WENV170106003
CEBV01031099
270416
Bacillota
CAC
Val
>WENV170105271
CEBV01001035
653346
Bacillota
TTC
Glu
>WENV170105404
CEBV01008576
653346
Bacillota
TTC
Glu
>WENV170105827
CEBV01023119
653346
Bacillota
TTC
Glu
>WENV170105936
CEBV01027874
86860
Bacillota
TGA
Ser
>WENV170105761
CEBV01021217
8223
Bacillota
GCT
Ser
>WENV170105937
CEBV01027874
8223
Bacillota
GCT
Ser
>WENV170106143
CEBV01037087
8223
Bacillota
GCT
Ser
>WENV170105311
CEBV01003133
779387
Bacillota
TTG
Gln
>WENV170106403
CEBV01047960
779387
Bacillota
TTG
Gln
>WENV170106469
CEBV01050860
779387
Bacillota
TTG
Gln
>WENV170105777
CEBV01022010
466790
Bacillota
CGG
Pro
>WENV170105379
CEBV01007435
270426
Bacillota
GAT
Ile
>WENV170106444
CEBV01050050
270426
Bacillota
GAT
Ile
>WENV170105339
CEBV01004657
451355
Bacillota
GAC
Val
>WENV170105352
CEBV01005447
451355
Bacillota
GAC
Val
>WENV170105922
CEBV01027404
451355
Bacillota
GAC
Val
>WENV170106413
CEBV01048038
451377
Bacillota
TAC
Val
>WENV170105759
CEBV01021007
468336
Bacillota
GCC
Gly
>WENV170106043
CEBV01032617
661851
Bacillota
GCA
Cys
>WENV170105910
CEBV01026678
270438
Bacillota
TCT
Arg
>WENV170106365
CEBV01045941
270438
Bacillota
TCT
Arg
>WENV170105371
CEBV01006715
451352
Bacillota
GGT
Thr
>WENV170105668
CEBV01018245
451352
Bacillota
GGT
Thr
>WENV170106179
CEBV01038383
112239
Bacillota
CAG
Leu
>WENV170105376
CEBV01007358
112239
Bacillota
CAG
Leu
>WENV170105724
CEBV01020041
112239
Bacillota
CAG
Leu
>WENV170105437
CEBV01009946
466782
Bacillota
CCC
Gly
>WENV170105935
CEBV01027873
466782
Bacillota
CCC
Gly
>WENV170105689
CEBV01019274
779385
Bacillota
CTG
Gln
>WENV170105776
CEBV01022010
779385
Bacillota
CTG
Gln
>WENV170106430
CEBV01048851
779385
Bacillota
CTG
Gln
>WENV170105972
CEBV01029428
451357
Bacillota
CTT
Lys
>WENV170105986
CEBV01030318
451357
Bacillota
CTT
Lys
>WENV170106317
CEBV01044401
451357
Bacillota
CTT
Lys
>WENV170105403
CEBV01008576
270546
Bacillota
CAT
Met
>WENV170105360
CEBV01005881
20504
Bacillota
GGA
Ser
>WENV170106268
CEBV01042590
20504
Bacillota
GGA
Ser
>WENV170105581
CEBV01015231
451384
Bacillota
TGG
Pro
>WENV170105821
CEBV01022812
451384
Bacillota
TGG
Pro
>WENV170106184
CEBV01038389
451384
Bacillota
TGG
Pro
>WENV170105267
CEBV01000667
466773
Bacillota
GGC
Ala
>WENV170105657
CEBV01017930
451375
Bacillota
GGC
Ala
>WENV170106057
CEBV01033052
451375
Bacillota
GGC
Ala
>WENV170105613
CEBV01016172
270447
Bacillota
GTT
Asn
>WENV170105976
CEBV01029473
270447
Bacillota
GTT
Asn
>WENV170106152
CEBV01037434
270447
Bacillota
GTT
Asn
>WENV170106329
CEBV01044769
270447
Bacillota
GTT
Asn
>WENV170106151
CEBV01037434
653369
Bacillota
CTC
Glu
>WENV170106328
CEBV01044769
653369
Bacillota
CTC
Glu
>WENV170105474
CEBV01011239
451376
Bacillota
GCC
Gly
>WENV170105912
CEBV01026683
451376
Bacillota
GCC
Gly
>WENV170106412
CEBV01048038
451376
Bacillota
GCC
Gly
>WENV170106470
CEBV01050877
653347
Bacillota
TGT
Thr
>WENV170105971
CEBV01029270
270405
Bacillota
ACG
Arg
>WENV170106297
CEBV01043187
270405
Bacillota
ACG
Arg
>WENV170106327
CEBV01044755
270405
Bacillota
ACG
Arg
>WENV170106311
CEBV01043942
284784
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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