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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
82 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170108807
CECA01046919
451354
Bacteroidota
TTT
Lys
>WENV170108943
CECA01054570
451354
Bacteroidota
TTT
Lys
>WENV170109260
CECA01071034
654770
Bacteroidota
GGT
Thr
>WENV170108153
CECA01014425
113533
Bacteroidota
CAG
Leu
>WENV170108899
CECA01052012
113533
Bacteroidota
CAG
Leu
>WENV170108073
CECA01009907
451478
Bacteroidota
TTT
Lys
>WENV170108476
CECA01031233
451478
Bacteroidota
TTT
Lys
>WENV170108975
CECA01055675
451478
Bacteroidota
TTT
Lys
>WENV170109136
CECA01063878
451478
Bacteroidota
TTT
Lys
>WENV170109266
CECA01071036
658239
Bacteroidota
CTC
Glu
>WENV170108974
CECA01055675
112241
Bacteroidota
CAA
Leu
>WENV170108209
CECA01017825
451360
Bacteroidota
CGT
Thr
>WENV170108262
CECA01020165
451360
Bacteroidota
CGT
Thr
>WENV170109254
CECA01070945
458644
Bacteroidota
CCC
Gly
>WENV170109280
CECA01071155
458644
Bacteroidota
CCC
Gly
>WENV170109244
CECA01070402
783463
Bacteroidota
CTG
Gln
>WENV170109069
CECA01060228
273124
Bacteroidota
GTC
Asp
>WENV170108973
CECA01055675
180313
Bacteroidota
TAG
Leu
>WENV170109365
CECA01075242
180313
Bacteroidota
TAG
Leu
>WENV170109168
CECA01066225
86859
Bacteroidota
TGA
Ser
>WENV170107978
CECA01003237
270514
Bacteroidota
GTT
Asn
>WENV170107979
CECA01003237
270514
Bacteroidota
GTT
Asn
>WENV170107980
CECA01003237
270514
Bacteroidota
GTT
Asn
>WENV170107981
CECA01003237
270514
Bacteroidota
GTT
Asn
>WENV170108488
CECA01031814
270514
Bacteroidota
GTT
Asn
>WENV170108720
CECA01043300
270514
Bacteroidota
GTT
Asn
>WENV170108115
CECA01012888
451389
Bacteroidota
GCC
Gly
>WENV170108117
CECA01012888
451389
Bacteroidota
GCC
Gly
>WENV170108119
CECA01012888
451389
Bacteroidota
GCC
Gly
>WENV170108231
CECA01019086
451389
Bacteroidota
GCC
Gly
>WENV170108659
CECA01040267
451389
Bacteroidota
GCC
Gly
>WENV170108661
CECA01040267
451389
Bacteroidota
GCC
Gly
>WENV170109017
CECA01057363
451389
Bacteroidota
GCC
Gly
>WENV170108265
CECA01020270
179905
Bacteroidota
TAG
Leu
>WENV170108168
CECA01014797
660446
Bacteroidota
CCT
Arg
>WENV170108424
CECA01029331
277204
Bacteroidota
GTC
Asp
>WENV170109262
CECA01071034
277204
Bacteroidota
GTC
Asp
>WENV170109263
CECA01071034
277204
Bacteroidota
GTC
Asp
>WENV170109264
CECA01071034
277204
Bacteroidota
GTC
Asp
>WENV170109265
CECA01071034
277204
Bacteroidota
GTC
Asp
>WENV170108746
CECA01044883
240600
Bacteroidota
GGG
Pro
>WENV170109214
CECA01069689
240600
Bacteroidota
GGG
Pro
>WENV170109267
CECA01071038
240600
Bacteroidota
GGG
Pro
>WENV170107994
CECA01004144
779393
Bacteroidota
TTG
Gln
>WENV170107936
CECA01000650
279189
Bacteroidota
GTT
Asn
>WENV170108150
CECA01014425
270494
Bacteroidota
CGG
Pro
>WENV170108892
CECA01052012
270494
Bacteroidota
CGG
Pro
>WENV170108286
CECA01022395
782347
Bacteroidota
CTG
Gln
>WENV170108172
CECA01015240
270471
Bacteroidota
GGC
Ala
>WENV170108275
CECA01020818
451484
Bacteroidota
CAT
Met
>WENV170109185
CECA01067829
451484
Bacteroidota
CAT
Met
>WENV170109146
CECA01064344
653343
Bacteroidota
CCT
Arg
>WENV170108449
CECA01029976
30567
Bacteroidota
GGA
Ser
>WENV170108895
CECA01052012
30567
Bacteroidota
GGA
Ser
>WENV170109279
CECA01071092
30567
Bacteroidota
GGA
Ser
>WENV170108057
CECA01008844
466831
Bacteroidota
GCC
Gly
>WENV170108738
CECA01044027
466831
Bacteroidota
GCC
Gly
>WENV170108058
CECA01008844
466831
Bacteroidota
GCC
Gly
>WENV170108735
CECA01044027
466831
Bacteroidota
GCC
Gly
>WENV170108736
CECA01044027
466831
Bacteroidota
GCC
Gly
>WENV170108737
CECA01044027
466831
Bacteroidota
GCC
Gly
>WENV170108169
CECA01014797
653388
Bacteroidota
TTC
Glu
>WENV170108170
CECA01014797
653388
Bacteroidota
TTC
Glu
>WENV170108374
CECA01026866
463028
Bacteroidota
CAT
Met
>WENV170108075
CECA01009907
653774
Bacteroidota
CAT
Met
>WENV170108545
CECA01035575
653774
Bacteroidota
CAT
Met
>WENV170109138
CECA01063878
653774
Bacteroidota
CAT
Met
>WENV170109312
CECA01072177
653774
Bacteroidota
CAT
Met
>WENV170109371
CECA01075670
653774
Bacteroidota
CAT
Met
>WENV170108311
CECA01023181
153692
Bacteroidota
GTA
Tyr
>WENV170108426
CECA01029331
153692
Bacteroidota
GTA
Tyr
>WENV170108744
CECA01044576
153692
Bacteroidota
GTA
Tyr
>WENV170109259
CECA01071034
153692
Bacteroidota
GTA
Tyr
>WENV170109350
CECA01074587
153692
Bacteroidota
GTA
Tyr
>WENV170109358
CECA01075077
153692
Bacteroidota
GTA
Tyr
>WENV170108458
CECA01030401
653350
Bacteroidota
GCA
Cys
>WENV170109040
CECA01059122
653350
Bacteroidota
GCA
Cys
>WENV170109171
CECA01066702
653350
Bacteroidota
GCA
Cys
>WENV170108151
CECA01014425
451452
Bacteroidota
CCA
Trp
>WENV170108893
CECA01052012
451452
Bacteroidota
CCA
Trp
>WENV170109351
CECA01074587
270497
Bacteroidota
GTG
His
>WENV170109352
CECA01074587
270497
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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