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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
112 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170108449
CECA01029976
35775
Bacteroidota
GGA
Ser
>WENV170108895
CECA01052012
35775
Bacteroidota
GGA
Ser
>WENV170109279
CECA01071092
35775
Bacteroidota
GGA
Ser
>WENV170108154
CECA01014425
511174
Bacteroidota
CGT
Thr
>WENV170108803
CECA01046605
511174
Bacteroidota
CGT
Thr
>WENV170108900
CECA01052012
511174
Bacteroidota
CGT
Thr
>WENV170108150
CECA01014425
308644
Bacteroidota
CGG
Pro
>WENV170108892
CECA01052012
308644
Bacteroidota
CGG
Pro
>WENV170108131
CECA01013540
511171
Bacteroidota
CCA
Trp
>WENV170109261
CECA01071034
511171
Bacteroidota
CCA
Trp
>WENV170108333
CECA01024723
872825
Bacteroidota
CTG
Gln
>WENV170109292
CECA01071464
515232
Bacteroidota
GCC
Gly
>WENV170108209
CECA01017825
511207
Bacteroidota
CGT
Thr
>WENV170108262
CECA01020165
511207
Bacteroidota
CGT
Thr
>WENV170108701
CECA01042121
53834
Bacteroidota
GCT
Ser
>WENV170109311
CECA01072177
272446
Bacteroidota
TGG
Pro
>WENV170108577
CECA01037432
511172
Bacteroidota
CTT
Lys
>WENV170108578
CECA01037432
511172
Bacteroidota
CTT
Lys
>WENV170108191
CECA01016596
308642
Bacteroidota
TCT
Arg
>WENV170109211
CECA01069189
329947
Bacteroidota
TCT
Arg
>WENV170108365
CECA01026431
272736
Bacteroidota
TGG
Pro
>WENV170108153
CECA01014425
128387
Bacteroidota
CAG
Leu
>WENV170108899
CECA01052012
128387
Bacteroidota
CAG
Leu
>WENV170108306
CECA01023004
36134
Bacteroidota
GGA
Ser
>WENV170108688
CECA01041025
312635
Bacteroidota
GTC
Asp
>WENV170108047
CECA01008054
272738
Bacteroidota
GAC
Val
>WENV170108112
CECA01012472
272738
Bacteroidota
GAC
Val
>WENV170109168
CECA01066225
99769
Bacteroidota
TGA
Ser
>WENV170108973
CECA01055675
204373
Bacteroidota
TAG
Leu
>WENV170109365
CECA01075242
204373
Bacteroidota
TAG
Leu
>WENV170109173
CECA01066702
53243
Bacteroidota
GCT
Ser
>WENV170108152
CECA01014425
308645
Bacteroidota
GGC
Ala
>WENV170108894
CECA01052012
308645
Bacteroidota
GGC
Ala
>WENV170108459
CECA01030401
734259
Bacteroidota
GCA
Cys
>WENV170109172
CECA01066702
734259
Bacteroidota
GCA
Cys
>WENV170108275
CECA01020818
510261
Bacteroidota
>WENV170109185
CECA01067829
510261
Bacteroidota
>WENV170108169
CECA01014797
734256
Bacteroidota
TTC
Glu
>WENV170108170
CECA01014797
734256
Bacteroidota
TTC
Glu
>WENV170108071
CECA01009907
53240
Bacteroidota
CGA
Ser
>WENV170109134
CECA01063878
53240
Bacteroidota
CGA
Ser
>WENV170107986
CECA01003296
515079
Bacteroidota
TTT
Lys
>WENV170108243
CECA01019143
515079
Bacteroidota
TTT
Lys
>WENV170109094
CECA01061169
515079
Bacteroidota
TTT
Lys
>WENV170109242
CECA01070400
312287
Bacteroidota
GGC
Ala
>WENV170109237
CECA01070390
515076
Bacteroidota
CCA
Trp
>WENV170108946
CECA01055109
515078
Bacteroidota
CCA
Trp
>WENV170108424
CECA01029331
308640
Bacteroidota
GTC
Asp
>WENV170109262
CECA01071034
308640
Bacteroidota
GTC
Asp
>WENV170109263
CECA01071034
308640
Bacteroidota
GTC
Asp
>WENV170109264
CECA01071034
308640
Bacteroidota
GTC
Asp
>WENV170109265
CECA01071034
308640
Bacteroidota
GTC
Asp
>WENV170108574
CECA01036967
533681
Bacteroidota
CGT
Thr
>WENV170108323
CECA01023780
329069
Bacteroidota
>WENV170108612
CECA01038938
329069
Bacteroidota
>WENV170107936
CECA01000650
310039
Bacteroidota
GTT
Asn
>WENV170109351
CECA01074587
308643
Bacteroidota
GTG
His
>WENV170109352
CECA01074587
308643
Bacteroidota
GTG
His
>WENV170109240
CECA01070390
205557
Bacteroidota
GTA
Tyr
>WENV170108057
CECA01008844
511084
Bacteroidota
GCC
Gly
>WENV170108058
CECA01008844
511084
Bacteroidota
GCC
Gly
>WENV170108735
CECA01044027
511084
Bacteroidota
GCC
Gly
>WENV170108736
CECA01044027
511084
Bacteroidota
GCC
Gly
>WENV170108737
CECA01044027
511084
Bacteroidota
GCC
Gly
>WENV170108738
CECA01044027
511084
Bacteroidota
GCC
Gly
>WENV170109236
CECA01070390
515075
Bacteroidota
GTT
Asn
>WENV170109260
CECA01071034
733354
Bacteroidota
GGT
Thr
>WENV170108311
CECA01023181
174575
Bacteroidota
GTA
Tyr
>WENV170108426
CECA01029331
174575
Bacteroidota
GTA
Tyr
>WENV170108744
CECA01044576
174575
Bacteroidota
GTA
Tyr
>WENV170109259
CECA01071034
174575
Bacteroidota
GTA
Tyr
>WENV170109350
CECA01074587
174575
Bacteroidota
GTA
Tyr
>WENV170109358
CECA01075077
174575
Bacteroidota
GTA
Tyr
>WENV170108116
CECA01012888
99764
Bacteroidota
TAA
Leu
>WENV170108118
CECA01012888
99764
Bacteroidota
TAA
Leu
>WENV170108660
CECA01040267
99764
Bacteroidota
TAA
Leu
>WENV170109155
CECA01065579
272737
Bacteroidota
GGG
Pro
>WENV170108974
CECA01055675
128389
Bacteroidota
CAA
Leu
>WENV170108265
CECA01020270
204683
Bacteroidota
TAG
Leu
>WENV170108233
CECA01019086
128388
Bacteroidota
GAG
Leu
>WENV170108748
CECA01045033
312290
Bacteroidota
GTG
His
>WENV170108783
CECA01046227
129095
Bacteroidota
CAA
Leu
>WENV170108746
CECA01044883
272301
Bacteroidota
GGG
Pro
>WENV170109214
CECA01069689
272301
Bacteroidota
GGG
Pro
>WENV170109267
CECA01071038
272301
Bacteroidota
GGG
Pro
>WENV170109002
CECA01056819
312636
Bacteroidota
GAT
Ile
>WENV170109235
CECA01070390
515074
Bacteroidota
>WENV170109266
CECA01071036
734257
Bacteroidota
CTC
Glu
>WENV170108694
CECA01041712
515077
Bacteroidota
CTC
Glu
>WENV170108457
CECA01030220
312289
Bacteroidota
TCT
Arg
>WENV170108168
CECA01014797
733749
Bacteroidota
CCT
Arg
>WENV170108888
CECA01051570
100169
Bacteroidota
TGA
Ser
>WENV170109096
CECA01061316
100169
Bacteroidota
TGA
Ser
>WENV170107984
CECA01003237
736124
Bacteroidota
CCT
Arg
>WENV170107978
CECA01003237
307218
Bacteroidota
GTT
Asn
>WENV170107979
CECA01003237
307218
Bacteroidota
GTT
Asn
>WENV170107980
CECA01003237
307218
Bacteroidota
GTT
Asn
>WENV170107981
CECA01003237
307218
Bacteroidota
GTT
Asn
>WENV170108488
CECA01031814
307218
Bacteroidota
GTT
Asn
>WENV170108720
CECA01043300
307218
Bacteroidota
GTT
Asn
>WENV170108533
CECA01034352
272445
Bacteroidota
GGG
Pro
>WENV170108148
CECA01014227
871948
Bacteroidota
TTG
Gln
>WENV170108791
CECA01046316
871948
Bacteroidota
TTG
Gln
>WENV170109364
CECA01075242
871948
Bacteroidota
TTG
Gln
>WENV170108286
CECA01022395
871954
Bacteroidota
CTG
Gln
>WENV170108075
CECA01009907
733364
Bacteroidota
>WENV170108545
CECA01035575
733364
Bacteroidota
>WENV170109138
CECA01063878
733364
Bacteroidota
>WENV170109312
CECA01072177
733364
Bacteroidota
>WENV170109371
CECA01075670
733364
Bacteroidota
>WENV170109244
CECA01070402
877293
Bacteroidota
CTG
Gln
>WENV170109069
CECA01060228
307219
Bacteroidota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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