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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170109673
CECB01005019
23596
Bacillota
GGA
Ser
>WENV170109664
CECB01004884
10068
Bacillota
GCT
Ser
>WENV170109626
CECB01004131
732824
Bacillota
CCG
Arg
>WENV170109739
CECB01006063
246948
Bacillota
GAG
Leu
>WENV170109440
CECB01000952
508814
Bacillota
CGT
Thr
>WENV170109600
CECB01003590
508791
Bacillota
CGC
Ala
>WENV170109758
CECB01006445
35556
Bacillota
CGA
Ser
>WENV170109524
CECB01002553
306574
Bacillota
GTG
His
>WENV170109710
CECB01005688
732827
Bacillota
TTG
Gln
>WENV170109675
CECB01005060
871368
Bacillota
CTG
Gln
>WENV170109695
CECB01005389
871368
Bacillota
CTG
Gln
>WENV170109729
CECB01005913
733028
Bacillota
GCA
Cys
>WENV170109597
CECB01003471
174325
Bacillota
GTA
Tyr
>WENV170109788
CECB01006995
306571
Bacillota
CCG
Arg
>WENV170109643
CECB01004606
871369
Bacillota
TTG
Gln
>WENV170109700
CECB01005460
871369
Bacillota
TTG
Gln
>WENV170109443
CECB01000962
733029
Bacillota
TTC
Glu
>WENV170109633
CECB01004267
733029
Bacillota
TTC
Glu
>WENV170109447
CECB01001117
306563
Bacillota
GTC
Asp
>WENV170109606
CECB01003686
508795
Bacillota
GGT
Thr
>WENV170109607
CECB01003686
508795
Bacillota
GGT
Thr
>WENV170109455
CECB01001148
732825
Bacillota
GCC
Gly
>WENV170109522
CECB01002553
263191
Bacillota
CAA
Leu
>WENV170109687
CECB01005240
508810
Bacillota
CCC
Gly
>WENV170109689
CECB01005269
306771
Bacillota
GAT
Ile
>WENV170109523
CECB01002553
306566
Bacillota
TCT
Arg
>WENV170109525
CECB01002631
306566
Bacillota
TCT
Arg
>WENV170109632
CECB01004267
306578
Bacillota
CAT
Met
>WENV170109688
CECB01005269
509044
Bacillota
TGC
Ala
>WENV170109406
CECB01000212
204160
Bacillota
GTA
Tyr
>WENV170109446
CECB01001117
508808
Bacillota
CCA
Trp
>WENV170109464
CECB01001249
508796
Bacillota
TGG
Pro
>WENV170109784
CECB01006979
508796
Bacillota
TGG
Pro
>WENV170109728
CECB01005913
508799
Bacillota
GCC
Gly
>WENV170109671
CECB01005007
127967
Bacillota
CAG
Leu
>WENV170109408
CECB01000212
508434
Bacillota
TTT
Lys
>WENV170109782
CECB01006903
733027
Bacillota
TCC
Gly
>WENV170109439
CECB01000902
508806
Bacillota
GGC
Ala
>WENV170109441
CECB01000956
733025
Bacillota
CTC
Glu
>WENV170109494
CECB01002005
733025
Bacillota
CTC
Glu
>WENV170109645
CECB01004690
306562
Bacillota
CAC
Val
>WENV170109526
CECB01002631
306567
Bacillota
GTG
His
>WENV170109582
CECB01003407
871296
Bacillota
TCC
Gly
>WENV170109800
CECB01007304
871296
Bacillota
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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