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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
116 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170112478
CEGF01000890
14844
Gammaproteobacteria
GCT
Ser
>WENV170112550
CEGF01002915
328940
Gammaproteobacteria
ACG
Arg
>WENV170112551
CEGF01002915
328940
Gammaproteobacteria
ACG
Arg
>WENV170112552
CEGF01002915
328940
Gammaproteobacteria
ACG
Arg
>WENV170112694
CEGF01015424
871819
Gammaproteobacteria
GCA
Cys
>WENV170112516
CEGF01002036
247113
Gammaproteobacteria
GTA
Tyr
>WENV170112691
CEGF01014996
507193
Gammaproteobacteria
GAA
Phe
>WENV170112614
CEGF01006660
307078
Gammaproteobacteria
CGG
Pro
>WENV170112517
CEGF01002036
871363
Gammaproteobacteria
TCC
Gly
>WENV170112522
CEGF01002340
129080
Gammaproteobacteria
GAG
Leu
>WENV170112612
CEGF01006601
307079
Gammaproteobacteria
CCG
Arg
>WENV170112613
CEGF01006602
307079
Gammaproteobacteria
CCG
Arg
>WENV170112583
CEGF01004988
513383
Gammaproteobacteria
TAC
Val
>WENV170112618
CEGF01007191
513383
Gammaproteobacteria
TAC
Val
>WENV170112579
CEGF01004642
512490
Gammaproteobacteria
GTT
Asn
>WENV170112580
CEGF01004642
512490
Gammaproteobacteria
GTT
Asn
>WENV170112581
CEGF01004642
512490
Gammaproteobacteria
GTT
Asn
>WENV170112630
CEGF01007922
512490
Gammaproteobacteria
GTT
Asn
>WENV170112492
CEGF01001358
325625
Gammaproteobacteria
GAC
Val
>WENV170112654
CEGF01009207
325625
Gammaproteobacteria
GAC
Val
>WENV170112676
CEGF01011775
325625
Gammaproteobacteria
GAC
Val
>WENV170112564
CEGF01003705
513282
Gammaproteobacteria
GTT
Asn
>WENV170112684
CEGF01012811
513282
Gammaproteobacteria
GTT
Asn
>WENV170112587
CEGF01005245
310501
Gammaproteobacteria
CAT
Met
>WENV170112567
CEGF01003776
326361
Gammaproteobacteria
CGG
Pro
>WENV170112571
CEGF01004122
128053
Gammaproteobacteria
CAG
Leu
>WENV170112536
CEGF01002643
509388
Gammaproteobacteria
TTC
Glu
>WENV170112555
CEGF01003143
509388
Gammaproteobacteria
TTC
Glu
>WENV170112563
CEGF01003581
204349
Gammaproteobacteria
TAG
Leu
>WENV170112635
CEGF01008118
204349
Gammaproteobacteria
TAG
Leu
>WENV170112490
CEGF01001241
512492
Gammaproteobacteria
TAC
Val
>WENV170112648
CEGF01008923
512492
Gammaproteobacteria
TAC
Val
>WENV170112664
CEGF01010476
512492
Gammaproteobacteria
TAC
Val
>WENV170112667
CEGF01010476
512492
Gammaproteobacteria
TAC
Val
>WENV170112538
CEGF01002690
307089
Gammaproteobacteria
TCT
Arg
>WENV170112539
CEGF01002690
734899
Gammaproteobacteria
GTG
His
>WENV170112482
CEGF01001035
513379
Gammaproteobacteria
GTT
Asn
>WENV170112483
CEGF01001035
513379
Gammaproteobacteria
GTT
Asn
>WENV170112623
CEGF01007485
204578
Gammaproteobacteria
GTA
Tyr
>WENV170112625
CEGF01007486
204578
Gammaproteobacteria
GTA
Tyr
>WENV170112557
CEGF01003276
307086
Gammaproteobacteria
CAT
Met
>WENV170112558
CEGF01003293
307086
Gammaproteobacteria
CAT
Met
>WENV170112593
CEGF01005580
307086
Gammaproteobacteria
CAT
Met
>WENV170112594
CEGF01005581
307086
Gammaproteobacteria
CAT
Met
>WENV170112451
CEGF01000143
512491
Gammaproteobacteria
TTC
Glu
>WENV170112462
CEGF01000360
512491
Gammaproteobacteria
TTC
Glu
>WENV170112568
CEGF01003853
128768
Gammaproteobacteria
CAG
Leu
>WENV170112569
CEGF01003853
128768
Gammaproteobacteria
CAG
Leu
>WENV170112595
CEGF01005582
308130
Gammaproteobacteria
CAT
Met
>WENV170112644
CEGF01008683
35979
Gammaproteobacteria
TGA
Ser
>WENV170112690
CEGF01014920
509450
Gammaproteobacteria
TTT
Lys
>WENV170112616
CEGF01007179
309829
Gammaproteobacteria
ACG
Arg
>WENV170112617
CEGF01007179
309829
Gammaproteobacteria
ACG
Arg
>WENV170112661
CEGF01009926
309829
Gammaproteobacteria
ACG
Arg
>WENV170112662
CEGF01009926
309829
Gammaproteobacteria
ACG
Arg
>WENV170112576
CEGF01004167
872053
Gammaproteobacteria
GCA
Cys
>WENV170112560
CEGF01003495
872388
Gammaproteobacteria
TCC
Gly
>WENV170112620
CEGF01007239
308118
Gammaproteobacteria
GAC
Val
>WENV170112524
CEGF01002341
128055
Gammaproteobacteria
GAG
Leu
>WENV170112678
CEGF01011851
128055
Gammaproteobacteria
GAG
Leu
>WENV170112656
CEGF01009734
53511
Gammaproteobacteria
GCT
Ser
>WENV170112589
CEGF01005282
247205
Gammaproteobacteria
GTA
Tyr
>WENV170112689
CEGF01014612
247205
Gammaproteobacteria
GTA
Tyr
>WENV170112489
CEGF01001241
307080
Gammaproteobacteria
GTC
Asp
>WENV170112491
CEGF01001241
307080
Gammaproteobacteria
GTC
Asp
>WENV170112647
CEGF01008923
307080
Gammaproteobacteria
GTC
Asp
>WENV170112649
CEGF01008923
307080
Gammaproteobacteria
GTC
Asp
>WENV170112665
CEGF01010476
307080
Gammaproteobacteria
GTC
Asp
>WENV170112666
CEGF01010476
307080
Gammaproteobacteria
GTC
Asp
>WENV170112668
CEGF01010476
307080
Gammaproteobacteria
GTC
Asp
>WENV170112501
CEGF01001753
310583
Gammaproteobacteria
CCG
Arg
>WENV170112631
CEGF01007987
338934
Gammaproteobacteria
CAT
Met
>WENV170112633
CEGF01007987
338934
Gammaproteobacteria
CAT
Met
>WENV170112637
CEGF01008372
338934
Gammaproteobacteria
CAT
Met
>WENV170112639
CEGF01008372
338934
Gammaproteobacteria
CAT
Met
>WENV170112624
CEGF01007486
513381
Gammaproteobacteria
TGT
Thr
>WENV170112515
CEGF01002036
511608
Gammaproteobacteria
TGT
Thr
>WENV170112499
CEGF01001682
307085
Gammaproteobacteria
CCT
Arg
>WENV170112680
CEGF01012000
307085
Gammaproteobacteria
CCT
Arg
>WENV170112681
CEGF01012509
307085
Gammaproteobacteria
CCT
Arg
>WENV170112692
CEGF01015028
307085
Gammaproteobacteria
CCT
Arg
>WENV170112687
CEGF01014180
518063
Gammaproteobacteria
GTT
Asn
>WENV170112546
CEGF01002734
338931
Gammaproteobacteria
>WENV170112596
CEGF01005582
204577
Gammaproteobacteria
TAG
Leu
>WENV170112597
CEGF01005582
733933
Gammaproteobacteria
TTG
Gln
>WENV170112598
CEGF01005582
733933
Gammaproteobacteria
TTG
Gln
>WENV170112688
CEGF01014569
510632
Gammaproteobacteria
TTT
Lys
>WENV170112609
CEGF01006051
871522
Gammaproteobacteria
GCA
Cys
>WENV170112652
CEGF01009125
871522
Gammaproteobacteria
GCA
Cys
>WENV170112475
CEGF01000884
128630
Gammaproteobacteria
TAA
Leu
>WENV170112653
CEGF01009125
128630
Gammaproteobacteria
TAA
Leu
>WENV170112650
CEGF01009098
128738
Gammaproteobacteria
CAA
Leu
>WENV170112599
CEGF01005582
130908
Gammaproteobacteria
CAG
Leu
>WENV170112584
CEGF01005020
249229
Gammaproteobacteria
GTA
Tyr
>WENV170112572
CEGF01004122
128054
Gammaproteobacteria
CAG
Leu
>WENV170112541
CEGF01002695
307087
Gammaproteobacteria
GGG
Pro
>WENV170112497
CEGF01001620
733284
Gammaproteobacteria
GCC
Gly
>WENV170112498
CEGF01001640
733284
Gammaproteobacteria
GCC
Gly
>WENV170112608
CEGF01006051
733284
Gammaproteobacteria
GCC
Gly
>WENV170112651
CEGF01009125
733284
Gammaproteobacteria
GCC
Gly
>WENV170112509
CEGF01002033
513380
Gammaproteobacteria
GTG
His
>WENV170112511
CEGF01002034
513380
Gammaproteobacteria
GTG
His
>WENV170112540
CEGF01002690
734900
Gammaproteobacteria
GTG
His
>WENV170112573
CEGF01004151
612924
Gammaproteobacteria
TTT
Lys
>WENV170112574
CEGF01004151
612924
Gammaproteobacteria
TTT
Lys
>WENV170112477
CEGF01000889
99905
Gammaproteobacteria
GGA
Ser
>WENV170112512
CEGF01002035
309053
Gammaproteobacteria
TGG
Pro
>WENV170112532
CEGF01002615
735199
Gammaproteobacteria
TTG
Gln
>WENV170112534
CEGF01002627
735199
Gammaproteobacteria
TTG
Gln
>WENV170112578
CEGF01004307
735199
Gammaproteobacteria
TTG
Gln
>WENV170112465
CEGF01000513
309827
Gammaproteobacteria
>WENV170112504
CEGF01001979
309827
Gammaproteobacteria
>WENV170112619
CEGF01007224
309827
Gammaproteobacteria
>WENV170112561
CEGF01003495
733287
Gammaproteobacteria
GGT
Thr
>WENV170112683
CEGF01012714
514986
Gammaproteobacteria
TAC
Val
>WENV170112494
CEGF01001360
400454
Gammaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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