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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170135181
CENU01183884
32554
Bacteroidota
GGA
Ser
>WENV170134047
CENU01073264
462245
Bacteroidota
GCC
Gly
>WENV170133766
CENU01048741
271717
Bacteroidota
GTC
Asp
>WENV170133427
CENU01025312
456414
Bacteroidota
GAA
Phe
>WENV170135410
CENU01201169
456414
Bacteroidota
GAA
Phe
>WENV170134986
CENU01163734
452487
Bacteroidota
CCA
Trp
>WENV170135434
CENU01202274
452487
Bacteroidota
CCA
Trp
>WENV170135447
CENU01202635
452487
Bacteroidota
CCA
Trp
>WENV170134886
CENU01153621
272122
Bacteroidota
GTC
Asp
>WENV170135102
CENU01174896
655825
Bacteroidota
TTC
Glu
>WENV170135210
CENU01186567
655825
Bacteroidota
TTC
Glu
>WENV170135306
CENU01193855
655825
Bacteroidota
TTC
Glu
>WENV170135388
CENU01199970
655825
Bacteroidota
TTC
Glu
>WENV170135609
CENU01240117
452740
Bacteroidota
GAA
Phe
>WENV170133959
CENU01065504
280824
Bacteroidota
TGC
Ala
>WENV170134921
CENU01157827
655582
Bacteroidota
GCC
Gly
>WENV170133349
CENU01020493
271642
Bacteroidota
TCT
Arg
>WENV170134251
CENU01090687
240683
Bacteroidota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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