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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170152265
CEOE01066310
30553
Alphaproteobacteria
GGA
Ser
>WENV170152071
CEOE01030193
291540
Alphaproteobacteria
TGG
Pro
>WENV170151841
CEOE01002492
479115
Alphaproteobacteria
GTT
Asn
>WENV170152337
CEOE01091684
780661
Alphaproteobacteria
GCA
Cys
>WENV170152276
CEOE01070380
154065
Alphaproteobacteria
GAG
Leu
>WENV170152133
CEOE01041467
479047
Alphaproteobacteria
TTT
Lys
>WENV170152167
CEOE01047485
451742
Alphaproteobacteria
GGC
Ala
>WENV170152250
CEOE01059418
273450
Alphaproteobacteria
TCT
Arg
>WENV170152264
CEOE01066130
780327
Alphaproteobacteria
GCA
Cys
>WENV170152075
CEOE01030640
294262
Alphaproteobacteria
CCT
Arg
>WENV170152305
CEOE01081576
275560
Alphaproteobacteria
ACG
Arg
>WENV170152195
CEOE01050561
671670
Alphaproteobacteria
CAC
Val
>WENV170151823
CEOE01000227
654791
Alphaproteobacteria
CTC
Glu
>WENV170152258
CEOE01062507
275989
Alphaproteobacteria
CAT
Met
>WENV170151957
CEOE01010763
658005
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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