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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170193792
CEPI01031290
208910
Gammaproteobacteria
GTA
Tyr
>WENV170193681
CEPI01001803
733873
Gammaproteobacteria
TTG
Gln
>WENV170193671
CEPI01000962
513927
Gammaproteobacteria
CCA
Trp
>WENV170193685
CEPI01002552
512630
Gammaproteobacteria
TAC
Val
>WENV170193675
CEPI01001031
329007
Gammaproteobacteria
GGG
Pro
>WENV170193688
CEPI01002552
523228
Gammaproteobacteria
TTC
Glu
>WENV170193793
CEPI01031290
735235
Gammaproteobacteria
TCC
Gly
>WENV170193673
CEPI01001031
508127
Gammaproteobacteria
GTT
Asn
>WENV170193737
CEPI01010376
532686
Gammaproteobacteria
GAA
Phe
>WENV170193753
CEPI01012009
305302
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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