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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170198568
CEPL01022062
512395
Alphaproteobacteria
CGC
Ala
>WENV170199068
CEPL01072109
512270
Alphaproteobacteria
GTT
Asn
>WENV170199275
CEPL01095068
205934
Alphaproteobacteria
TAG
Leu
>WENV170199874
CEPL01248143
512271
Alphaproteobacteria
GGC
Ala
>WENV170198569
CEPL01022249
204893
Alphaproteobacteria
GTA
Tyr
>WENV170199312
CEPL01100842
512274
Alphaproteobacteria
CCA
Trp
>WENV170198478
CEPL01014033
309623
Alphaproteobacteria
ACG
Arg
>WENV170199031
CEPL01067602
307158
Alphaproteobacteria
TGG
Pro
>WENV170199698
CEPL01186471
512272
Alphaproteobacteria
CGT
Thr
>WENV170199687
CEPL01181036
53374
Alphaproteobacteria
GGA
Ser
>WENV170199151
CEPL01080458
509779
Alphaproteobacteria
TTC
Glu
>WENV170199749
CEPL01206672
309625
Alphaproteobacteria
TGT
Thr
>WENV170199318
CEPL01101283
309616
Alphaproteobacteria
TGG
Pro
>WENV170199571
CEPL01130507
309613
Alphaproteobacteria
>WENV170198778
CEPL01041186
509469
Alphaproteobacteria
CCA
Trp
>WENV170198915
CEPL01056483
204892
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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