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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170198356
CEPL01000792
311594
Bacteroidota
GAT
Ile
>WENV170198383
CEPL01004592
310507
Bacteroidota
TGC
Ala
>WENV170198427
CEPL01009033
734200
Bacteroidota
TTC
Glu
>WENV170199610
CEPL01132294
734200
Bacteroidota
TTC
Glu
>WENV170198671
CEPL01031316
175487
Bacteroidota
GTA
Tyr
>WENV170198996
CEPL01063797
737952
Bacteroidota
TTC
Glu
>WENV170198978
CEPL01062615
315085
Bacteroidota
TGC
Ala
>WENV170199587
CEPL01131247
99745
Bacteroidota
TGA
Ser
>WENV170198898
CEPL01054540
272547
Bacteroidota
TGG
Pro
>WENV170198874
CEPL01050911
512002
Bacteroidota
CCA
Trp
>WENV170199355
CEPL01106274
512002
Bacteroidota
CCA
Trp
>WENV170198648
CEPL01029545
273103
Bacteroidota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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