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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170199280
CEPL01095753
509623
Gammaproteobacteria
TGT
Thr
>WENV170199107
CEPL01076589
310411
Gammaproteobacteria
CAT
Met
>WENV170198635
CEPL01028404
204389
Gammaproteobacteria
GTA
Tyr
>WENV170198919
CEPL01056930
307285
Gammaproteobacteria
ACG
Arg
>WENV170198722
CEPL01035979
513927
Gammaproteobacteria
CCA
Trp
>WENV170199302
CEPL01098829
507094
Gammaproteobacteria
GTG
His
>WENV170198636
CEPL01028404
871574
Gammaproteobacteria
TCC
Gly
>WENV170199109
CEPL01076589
513184
Gammaproteobacteria
TTG
Gln
>WENV170199689
CEPL01182031
307281
Gammaproteobacteria
CAT
Met
>WENV170199108
CEPL01076589
205107
Gammaproteobacteria
TAG
Leu
>WENV170199305
CEPL01099457
507345
Gammaproteobacteria
TAC
Val
>WENV170198918
CEPL01056930
35623
Gammaproteobacteria
GCT
Ser
>WENV170199450
CEPL01119111
871090
Gammaproteobacteria
GCA
Cys
>WENV170199023
CEPL01066332
518063
Gammaproteobacteria
GTT
Asn
>WENV170198804
CEPL01043627
314409
Gammaproteobacteria
GTC
Asp
>WENV170198859
CEPL01049444
517660
Gammaproteobacteria
GGC
Ala
>WENV170198964
CEPL01061231
517660
Gammaproteobacteria
GGC
Ala
>WENV170199141
CEPL01079024
517660
Gammaproteobacteria
GGC
Ala
>WENV170199375
CEPL01108504
319326
Gammaproteobacteria
CAT
Met
>WENV170199154
CEPL01080554
512941
Gammaproteobacteria
TGT
Thr
>WENV170199500
CEPL01123552
53065
Gammaproteobacteria
TGA
Ser
>WENV170198433
CEPL01009760
507541
Gammaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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