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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170203666
CEPS01077170
270887
Alphaproteobacteria
TGG
Pro
>WENV170203417
CEPS01050277
655363
Alphaproteobacteria
GGT
Thr
>WENV170204128
CEPS01144825
455172
Alphaproteobacteria
GGC
Ala
>WENV170203522
CEPS01061015
273450
Alphaproteobacteria
TCT
Arg
>WENV170203137
CEPS01027555
113418
Alphaproteobacteria
CAG
Leu
>WENV170203380
CEPS01046533
113418
Alphaproteobacteria
CAG
Leu
>WENV170203329
CEPS01043282
454512
Alphaproteobacteria
CCA
Trp
>WENV170204127
CEPS01144588
455360
Alphaproteobacteria
CGC
Ala
>WENV170203509
CEPS01059221
112839
Alphaproteobacteria
CAG
Leu
>WENV170203105
CEPS01024591
304024
Alphaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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