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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170254910
CEQW01035098
311182
Cyanobacteriota
CGG
Pro
>WENV170254552
CEQW01006237
510622
Cyanobacteriota
CCA
Trp
>WENV170255145
CEQW01055128
311184
Cyanobacteriota
GTC
Asp
>WENV170254485
CEQW01002302
205246
Cyanobacteriota
AAG
Leu
>WENV170254921
CEQW01035604
733930
Cyanobacteriota
GAC
Val
>WENV170254742
CEQW01018326
518132
Cyanobacteriota
CGC
Ala
>WENV170255372
CEQW01098119
53590
Cyanobacteriota
CGA
Ser
>WENV170254775
CEQW01020663
513842
Cyanobacteriota
CGC
Ala
>WENV170254656
CEQW01012958
310974
Cyanobacteriota
GGG
Pro
>WENV170254803
CEQW01023343
733924
Cyanobacteriota
GTT
Asn
>WENV170254665
CEQW01013639
308109
Cyanobacteriota
CCG
Arg
>WENV170254993
CEQW01043331
308109
Cyanobacteriota
CCG
Arg
>WENV170254691
CEQW01014435
205244
Cyanobacteriota
TAG
Leu
>WENV170255077
CEQW01050290
311056
Cyanobacteriota
CGG
Pro
>WENV170255226
CEQW01062553
510628
Cyanobacteriota
CGT
Thr
>WENV170255044
CEQW01047815
513839
Cyanobacteriota
CCA
Trp
>WENV170254719
CEQW01015828
128877
Cyanobacteriota
CAG
Leu
>WENV170255038
CEQW01047158
735464
Cyanobacteriota
TTG
Gln
>WENV170254662
CEQW01013503
735602
Cyanobacteriota
GAC
Val
>WENV170255466
CEQW01124265
204571
Cyanobacteriota
TAG
Leu
>WENV170255115
CEQW01053062
310954
Cyanobacteriota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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