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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170254955
CEQW01039836
341421
Gammaproteobacteria
TGG
Pro
>WENV170255056
CEQW01048537
247712
Gammaproteobacteria
GTA
Tyr
>WENV170254843
CEQW01026701
509615
Gammaproteobacteria
TTT
Lys
>WENV170254796
CEQW01022989
308318
Gammaproteobacteria
CCA
Trp
>WENV170255250
CEQW01063823
876343
Gammaproteobacteria
GCA
Cys
>WENV170254555
CEQW01006585
129690
Gammaproteobacteria
CAA
Leu
>WENV170254882
CEQW01031445
326321
Gammaproteobacteria
CCG
Arg
>WENV170255057
CEQW01048537
872598
Gammaproteobacteria
TCC
Gly
>WENV170254958
CEQW01039836
323884
Gammaproteobacteria
GTC
Asp
>WENV170254968
CEQW01041347
321046
Gammaproteobacteria
CCG
Arg
>WENV170254957
CEQW01039836
534446
Gammaproteobacteria
GTG
His
>WENV170255260
CEQW01064444
510016
Gammaproteobacteria
GAA
Phe
>WENV170255321
CEQW01067398
312191
Gammaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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