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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170331733
CESW01087033
273835
Bacteroidota
GTT
Asn
>WENV170332275
CESW01144839
271717
Bacteroidota
GTC
Asp
>WENV170330925
CESW01013753
456414
Bacteroidota
GAA
Phe
>WENV170331190
CESW01034474
456414
Bacteroidota
GAA
Phe
>WENV170331864
CESW01102019
456414
Bacteroidota
GAA
Phe
>WENV170332237
CESW01141747
456414
Bacteroidota
GAA
Phe
>WENV170330864
CESW01007892
241614
Bacteroidota
GAC
Val
>WENV170331009
CESW01019578
452741
Bacteroidota
TCC
Gly
>WENV170331543
CESW01069503
452741
Bacteroidota
TCC
Gly
>WENV170330874
CESW01008502
452487
Bacteroidota
CCA
Trp
>WENV170331074
CESW01024920
452487
Bacteroidota
CCA
Trp
>WENV170332277
CESW01145008
452487
Bacteroidota
CCA
Trp
>WENV170331213
CESW01037642
272122
Bacteroidota
GTC
Asp
>WENV170331538
CESW01069206
272122
Bacteroidota
GTC
Asp
>WENV170332282
CESW01145155
272122
Bacteroidota
GTC
Asp
>WENV170331127
CESW01029509
655825
Bacteroidota
TTC
Glu
>WENV170331145
CESW01030785
459901
Bacteroidota
CCA
Trp
>WENV170332094
CESW01130251
459901
Bacteroidota
CCA
Trp
>WENV170331128
CESW01029526
452740
Bacteroidota
GAA
Phe
>WENV170331982
CESW01117331
453189
Bacteroidota
TTG
Gln
>WENV170331535
CESW01068798
241634
Bacteroidota
TGG
Pro
>WENV170330848
CESW01006540
278725
Bacteroidota
GTT
Asn
>WENV170331037
CESW01021799
278725
Bacteroidota
GTT
Asn
>WENV170331218
CESW01037973
240683
Bacteroidota
TGG
Pro
>WENV170331950
CESW01112499
240683
Bacteroidota
TGG
Pro
>WENV170331962
CESW01114794
240683
Bacteroidota
TGG
Pro
>WENV170332376
CESW01148640
240683
Bacteroidota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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