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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170485288
CEVN01093684
510150
Alphaproteobacteria
TGT
Thr
>WENV170486761
CEVN01363448
735056
Alphaproteobacteria
GAC
Val
>WENV170486136
CEVN01158417
204464
Alphaproteobacteria
CAG
Leu
>WENV170484990
CEVN01064700
321753
Alphaproteobacteria
CAT
Met
>WENV170486455
CEVN01272627
510559
Alphaproteobacteria
TAC
Val
>WENV170484500
CEVN01025970
733646
Alphaproteobacteria
GAC
Val
>WENV170486493
CEVN01289407
272364
Alphaproteobacteria
GGG
Pro
>WENV170484419
CEVN01020547
733793
Alphaproteobacteria
TTG
Gln
>WENV170484736
CEVN01041324
510370
Alphaproteobacteria
TTT
Lys
>WENV170486706
CEVN01352019
307158
Alphaproteobacteria
TGG
Pro
>WENV170484977
CEVN01063941
306664
Alphaproteobacteria
TGG
Pro
>WENV170485456
CEVN01107228
53139
Alphaproteobacteria
GGA
Ser
>WENV170485114
CEVN01075409
308780
Alphaproteobacteria
CCG
Arg
>WENV170486027
CEVN01155115
132878
Alphaproteobacteria
CAG
Leu
>WENV170484187
CEVN01003641
732495
Alphaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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