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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170485950
CEVN01151434
36079
Bacteroidota
GGA
Ser
>WENV170484577
CEVN01030457
518130
Bacteroidota
TTG
Gln
>WENV170485127
CEVN01077290
309637
Bacteroidota
GTT
Asn
>WENV170485928
CEVN01150360
734200
Bacteroidota
TTC
Glu
>WENV170486583
CEVN01322302
523994
Bacteroidota
TTT
Lys
>WENV170484953
CEVN01062632
272547
Bacteroidota
TGG
Pro
>WENV170485650
CEVN01126912
512002
Bacteroidota
CCA
Trp
>WENV170485165
CEVN01080702
273103
Bacteroidota
TAC
Val
>WENV170485793
CEVN01140455
273103
Bacteroidota
TAC
Val
>WENV170486527
CEVN01299700
327687
Bacteroidota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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