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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170484399
CEVN01019433
311182
Cyanobacteriota
CGG
Pro
>WENV170485160
CEVN01080416
738328
Cyanobacteriota
TGT
Thr
>WENV170486061
CEVN01156580
100796
Cyanobacteriota
CGA
Ser
>WENV170484752
CEVN01043625
311184
Cyanobacteriota
GTC
Asp
>WENV170484253
CEVN01008596
513776
Cyanobacteriota
GGC
Ala
>WENV170485639
CEVN01125347
513776
Cyanobacteriota
GGC
Ala
>WENV170484657
CEVN01036446
518132
Cyanobacteriota
CGC
Ala
>WENV170484670
CEVN01037447
174871
Cyanobacteriota
CAA
Leu
>WENV170485563
CEVN01117710
174871
Cyanobacteriota
CAA
Leu
>WENV170485108
CEVN01075183
737695
Cyanobacteriota
TGT
Thr
>WENV170486162
CEVN01159172
735613
Cyanobacteriota
TAC
Val
>WENV170485181
CEVN01081861
733924
Cyanobacteriota
GTT
Asn
>WENV170486214
CEVN01159870
308109
Cyanobacteriota
CCG
Arg
>WENV170484512
CEVN01026721
310467
Cyanobacteriota
GAT
Ile
>WENV170486243
CEVN01159977
308106
Cyanobacteriota
CAT
Met
>WENV170485902
CEVN01148079
311183
Cyanobacteriota
TGG
Pro
>WENV170485926
CEVN01150215
53644
Cyanobacteriota
GGA
Ser
>WENV170484403
CEVN01019789
510626
Cyanobacteriota
GTG
His
>WENV170484851
CEVN01052115
311058
Cyanobacteriota
GGG
Pro
>WENV170484647
CEVN01035898
216660
Cyanobacteriota
TAG
Leu
>WENV170485471
CEVN01108298
311056
Cyanobacteriota
CGG
Pro
>WENV170485193
CEVN01083838
510628
Cyanobacteriota
CGT
Thr
>WENV170484995
CEVN01065272
311068
Cyanobacteriota
CCT
Arg
>WENV170485379
CEVN01101648
311034
Cyanobacteriota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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