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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170541363
CXPN01001188
306396
Actinomycetota
GGG
Pro
>WENV170541383
CXPN01001381
508588
Actinomycetota
CCT
Arg
>WENV170541389
CXPN01001709
306398
Actinomycetota
CAA
Leu
>WENV170541376
CXPN01001285
871334
Actinomycetota
TTG
Gln
>WENV170541394
CXPN01002381
871335
Actinomycetota
CCC
Gly
>WENV170541384
CXPN01001489
306397
Actinomycetota
TCT
Arg
>WENV170541387
CXPN01001587
99518
Actinomycetota
CGA
Ser
>WENV170541391
CXPN01001865
508587
Actinomycetota
GTG
His
>WENV170541409
CXPN01002937
732524
Actinomycetota
CTG
Gln
>WENV170541361
CXPN01001044
258850
Actinomycetota
TAA
Leu
>WENV170541388
CXPN01001660
305638
Actinomycetota
TAC
Val
>WENV170541444
CXPN01005249
305638
Actinomycetota
TAC
Val
>WENV170541407
CXPN01002901
35547
Actinomycetota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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