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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170541556
CXPP01003569
451405
Actinomycetota
CTC
Glu
>WENV170541506
CXPP01001230
451659
Actinomycetota
CCT
Arg
>WENV170541527
CXPP01001974
451655
Actinomycetota
CCA
Trp
>WENV170541560
CXPP01004076
217997
Actinomycetota
TAG
Leu
>WENV170541558
CXPP01003766
270704
Actinomycetota
ACG
Arg
>WENV170541559
CXPP01003787
270417
Actinomycetota
CAA
Leu
>WENV170541557
CXPP01003569
653479
Actinomycetota
CTG
Gln
>WENV170541525
CXPP01001786
228603
Actinomycetota
TAA
Leu
>WENV170541507
CXPP01001404
451469
Actinomycetota
GTG
His
>WENV170541528
CXPP01001988
30568
Actinomycetota
GAG
Leu
>WENV170541530
CXPP01002322
270705
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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