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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170543427
CXQT01000009
306396
Actinomycetota
GGG
Pro
>WENV170543421
CXQT01000006
508588
Actinomycetota
CCT
Arg
>WENV170543451
CXQT01000078
306398
Actinomycetota
CAA
Leu
>WENV170543433
CXQT01000025
99421
Actinomycetota
TGA
Ser
>WENV170543431
CXQT01000023
305610
Actinomycetota
CAT
Met
>WENV170543460
CXQT01000098
871334
Actinomycetota
TTG
Gln
>WENV170543445
CXQT01000043
306400
Actinomycetota
TGG
Pro
>WENV170543442
CXQT01000041
871335
Actinomycetota
CCC
Gly
>WENV170543458
CXQT01000090
306397
Actinomycetota
TCT
Arg
>WENV170543463
CXQT01000106
99518
Actinomycetota
CGA
Ser
>WENV170543429
CXQT01000020
508587
Actinomycetota
GTG
His
>WENV170543435
CXQT01000027
732524
Actinomycetota
CTG
Gln
>WENV170543444
CXQT01000042
258850
Actinomycetota
TAA
Leu
>WENV170543461
CXQT01000098
510644
Actinomycetota
GGC
Ala
>WENV170543462
CXQT01000098
510644
Actinomycetota
GGC
Ala
>WENV170543448
CXQT01000059
305638
Actinomycetota
TAC
Val
>WENV170543437
CXQT01000030
305613
Actinomycetota
GAT
Ile
>WENV170543428
CXQT01000013
305625
Actinomycetota
CTT
Lys
>WENV170543459
CXQT01000094
35547
Actinomycetota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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