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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170545631
CXSE01000447
99769
Bacteroidota
TGA
Ser
>WENV170545621
CXSE01000137
36133
Bacteroidota
GGA
Ser
>WENV170545598
CXSE01000041
308675
Bacteroidota
GGC
Ala
>WENV170545591
CXSE01000031
515069
Bacteroidota
CCC
Gly
>WENV170545599
CXSE01000045
872105
Bacteroidota
TTG
Gln
>WENV170545604
CXSE01000056
129094
Bacteroidota
GAG
Leu
>WENV170545581
CXSE01000002
272734
Bacteroidota
TAC
Val
>WENV170545582
CXSE01000002
272734
Bacteroidota
TAC
Val
>WENV170545609
CXSE01000060
734283
Bacteroidota
CTC
Glu
>WENV170545610
CXSE01000071
311873
Bacteroidota
GTC
Asp
>WENV170545596
CXSE01000038
515071
Bacteroidota
TTT
Lys
>WENV170545655
CXSE01003194
515071
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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