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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170547349
CXTL01000030
306396
Actinomycetota
GGG
Pro
>WENV170547373
CXTL01000083
508588
Actinomycetota
CCT
Arg
>WENV170547357
CXTL01000049
306398
Actinomycetota
CAA
Leu
>WENV170547354
CXTL01000040
99421
Actinomycetota
TGA
Ser
>WENV170547360
CXTL01000052
305610
Actinomycetota
CAT
Met
>WENV170547339
CXTL01000017
871334
Actinomycetota
TTG
Gln
>WENV170547356
CXTL01000049
306400
Actinomycetota
TGG
Pro
>WENV170547350
CXTL01000031
306397
Actinomycetota
TCT
Arg
>WENV170547358
CXTL01000051
99518
Actinomycetota
CGA
Ser
>WENV170547366
CXTL01000070
508587
Actinomycetota
GTG
His
>WENV170547380
CXTL01000135
732524
Actinomycetota
CTG
Gln
>WENV170547355
CXTL01000047
258850
Actinomycetota
TAA
Leu
>WENV170547338
CXTL01000017
510644
Actinomycetota
GGC
Ala
>WENV170547381
CXTL01000176
510644
Actinomycetota
GGC
Ala
>WENV170547335
CXTL01000013
305638
Actinomycetota
TAC
Val
>WENV170547332
CXTL01000011
305613
Actinomycetota
GAT
Ile
>WENV170547340
CXTL01000021
305625
Actinomycetota
CTT
Lys
>WENV170547336
CXTL01000015
35547
Actinomycetota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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