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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170550222
CXVR01000148
508588
Actinomycetota
CCT
Arg
>WENV170550242
CXVR01000603
306398
Actinomycetota
CAA
Leu
>WENV170550212
CXVR01000037
99421
Actinomycetota
TGA
Ser
>WENV170550234
CXVR01000335
305610
Actinomycetota
CAT
Met
>WENV170550236
CXVR01000396
871334
Actinomycetota
TTG
Gln
>WENV170550249
CXVR01000738
306400
Actinomycetota
TGG
Pro
>WENV170550219
CXVR01000101
871335
Actinomycetota
CCC
Gly
>WENV170550218
CXVR01000090
306397
Actinomycetota
TCT
Arg
>WENV170550211
CXVR01000031
99518
Actinomycetota
CGA
Ser
>WENV170550232
CXVR01000297
508587
Actinomycetota
GTG
His
>WENV170550252
CXVR01000845
732524
Actinomycetota
CTG
Gln
>WENV170550210
CXVR01000028
258850
Actinomycetota
TAA
Leu
>WENV170550224
CXVR01000177
510644
Actinomycetota
GGC
Ala
>WENV170550225
CXVR01000177
510644
Actinomycetota
GGC
Ala
>WENV170550228
CXVR01000241
305613
Actinomycetota
GAT
Ile
>WENV170550213
CXVR01000062
305625
Actinomycetota
CTT
Lys
>WENV170550254
CXVR01000940
35547
Actinomycetota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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