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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170550814
CXWF01032341
204601
Alphaproteobacteria
TAA
Leu
>WENV170550572
CXWF01001316
128040
Alphaproteobacteria
GAG
Leu
>WENV170550688
CXWF01013845
308247
Alphaproteobacteria
>WENV170550787
CXWF01026816
735056
Alphaproteobacteria
GAC
Val
>WENV170550571
CXWF01001309
311476
Alphaproteobacteria
CCG
Arg
>WENV170550994
CXWF01062926
246978
Alphaproteobacteria
>WENV170550875
CXWF01042536
308241
Alphaproteobacteria
GTC
Asp
>WENV170550871
CXWF01041886
23693
Alphaproteobacteria
GCT
Ser
>WENV170550700
CXWF01015148
308242
Alphaproteobacteria
GTG
His
>WENV170550674
CXWF01011871
308898
Alphaproteobacteria
CCT
Arg
>WENV170550986
CXWF01062526
35742
Alphaproteobacteria
GGA
Ser
>WENV170550848
CXWF01037049
204893
Alphaproteobacteria
GTA
Tyr
>WENV170551050
CXWF01085974
871848
Alphaproteobacteria
TCC
Gly
>WENV170550771
CXWF01024554
309623
Alphaproteobacteria
ACG
Arg
>WENV170550907
CXWF01048159
53374
Alphaproteobacteria
GGA
Ser
>WENV170550694
CXWF01014873
307881
Alphaproteobacteria
GTG
His
>WENV170550770
CXWF01024381
309615
Alphaproteobacteria
GAC
Val
>WENV170551013
CXWF01067549
314164
Alphaproteobacteria
CCG
Arg
>WENV170550805
CXWF01029819
56282
Alphaproteobacteria
TGA
Ser
>WENV170550689
CXWF01013845
308248
Alphaproteobacteria
TGG
Pro
>WENV170550868
CXWF01041174
734002
Alphaproteobacteria
TTC
Glu
>WENV170550634
CXWF01006367
734796
Alphaproteobacteria
GGT
Thr
>WENV170551049
CXWF01085825
175230
Alphaproteobacteria
GAG
Leu
>WENV170551055
CXWF01090634
510767
Alphaproteobacteria
TTT
Lys
>WENV170550747
CXWF01021327
309616
Alphaproteobacteria
TGG
Pro
>WENV170551068
CXWF01094498
308246
Alphaproteobacteria
GGG
Pro
>WENV170550834
CXWF01035673
734004
Alphaproteobacteria
TTG
Gln
>WENV170550969
CXWF01058390
743666
Alphaproteobacteria
GAA
Phe
>WENV170550660
CXWF01010228
53149
Alphaproteobacteria
GCT
Ser
>WENV170550583
CXWF01002329
872390
Alphaproteobacteria
TCC
Gly
>WENV170550651
CXWF01008885
174332
Alphaproteobacteria
CAG
Leu
>WENV170550929
CXWF01051550
248199
Alphaproteobacteria
CAA
Leu
>WENV170550793
CXWF01028002
734005
Alphaproteobacteria
GGT
Thr
>WENV170550917
CXWF01049188
872187
Alphaproteobacteria
CTG
Gln
>WENV170550697
CXWF01015069
128298
Alphaproteobacteria
GAG
Leu
>WENV170550892
CXWF01045265
204892
Alphaproteobacteria
TAG
Leu
>WENV170550845
CXWF01036839
734848
Alphaproteobacteria
CAC
Val
>WENV170551011
CXWF01067118
510765
Alphaproteobacteria
GGC
Ala
>WENV170550822
CXWF01033282
328696
Alphaproteobacteria
ACG
Arg
>WENV170550684
CXWF01013297
204649
Alphaproteobacteria
TAG
Leu
>WENV170550661
CXWF01010230
524731
Alphaproteobacteria
CGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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