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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170550790
CXWF01027177
307078
Gammaproteobacteria
CGG
Pro
>WENV170550859
CXWF01039964
311351
Gammaproteobacteria
CAT
Met
>WENV170550584
CXWF01002440
512490
Gammaproteobacteria
GTT
Asn
>WENV170550810
CXWF01031273
307271
Gammaproteobacteria
CAT
Met
>WENV170550997
CXWF01063212
338539
Gammaproteobacteria
CCG
Arg
>WENV170550863
CXWF01040766
310501
Gammaproteobacteria
CAT
Met
>WENV170550710
CXWF01015912
326361
Gammaproteobacteria
CGG
Pro
>WENV170550730
CXWF01018813
872404
Gammaproteobacteria
CCC
Gly
>WENV170550953
CXWF01055496
513927
Gammaproteobacteria
CCA
Trp
>WENV170550607
CXWF01004381
130975
Gammaproteobacteria
TAA
Leu
>WENV170551014
CXWF01067579
204349
Gammaproteobacteria
TAG
Leu
>WENV170550628
CXWF01005923
512492
Gammaproteobacteria
TAC
Val
>WENV170550856
CXWF01039041
35988
Gammaproteobacteria
TGA
Ser
>WENV170550959
CXWF01056412
310423
Gammaproteobacteria
GGG
Pro
>WENV170550854
CXWF01038029
315455
Gammaproteobacteria
TCG
Arg
>WENV170550796
CXWF01028292
35979
Gammaproteobacteria
TGA
Ser
>WENV170550891
CXWF01045213
509450
Gammaproteobacteria
TTT
Lys
>WENV170550664
CXWF01010887
307269
Gammaproteobacteria
ACG
Arg
>WENV170550816
CXWF01032827
99969
Gammaproteobacteria
GGA
Ser
>WENV170550748
CXWF01021481
134600
Gammaproteobacteria
CAG
Leu
>WENV170550626
CXWF01005923
307080
Gammaproteobacteria
GTC
Asp
>WENV170550627
CXWF01005923
307080
Gammaproteobacteria
GTC
Asp
>WENV170550980
CXWF01061319
205131
Gammaproteobacteria
GAG
Leu
>WENV170551071
CXWF01094879
523228
Gammaproteobacteria
TTC
Glu
>WENV170550831
CXWF01034906
509385
Gammaproteobacteria
TTT
Lys
>WENV170550918
CXWF01049293
307085
Gammaproteobacteria
CCT
Arg
>WENV170550908
CXWF01048278
508127
Gammaproteobacteria
GTT
Asn
>WENV170550675
CXWF01011966
310503
Gammaproteobacteria
CGG
Pro
>WENV170550580
CXWF01002070
128738
Gammaproteobacteria
CAA
Leu
>WENV170550749
CXWF01021481
128054
Gammaproteobacteria
CAG
Leu
>WENV170550629
CXWF01005923
310422
Gammaproteobacteria
GTC
Asp
>WENV170550588
CXWF01003132
310424
Gammaproteobacteria
TCT
Arg
>WENV170550987
CXWF01062545
321046
Gammaproteobacteria
CCG
Arg
>WENV170550978
CXWF01060064
507541
Gammaproteobacteria
TAC
Val
>WENV170550979
CXWF01060651
507347
Gammaproteobacteria
GGC
Ala
>WENV170550670
CXWF01011627
305302
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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