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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170560490
CYGL01002791
509554
Bacteroidota
CCA
Trp
>WENV170560396
CYGL01001319
306889
Bacteroidota
GTC
Asp
>WENV170560397
CYGL01001319
306889
Bacteroidota
GTC
Asp
>WENV170560398
CYGL01001319
306889
Bacteroidota
GTC
Asp
>WENV170560123
CYGL01000096
872824
Bacteroidota
TTG
Gln
>WENV170560489
CYGL01002762
733197
Bacteroidota
GGT
Thr
>WENV170560124
CYGL01000096
736123
Bacteroidota
TTC
Glu
>WENV170560122
CYGL01000096
515076
Bacteroidota
CCA
Trp
>WENV170560043
CYGL01000020
306902
Bacteroidota
>WENV170560191
CYGL01000182
306902
Bacteroidota
>WENV170560241
CYGL01000269
306902
Bacteroidota
>WENV170560273
CYGL01000369
306902
Bacteroidota
>WENV170560420
CYGL01001418
306902
Bacteroidota
>WENV170560125
CYGL01000096
205557
Bacteroidota
GTA
Tyr
>WENV170560121
CYGL01000096
515075
Bacteroidota
GTT
Asn
>WENV170560523
CYGL01004529
306899
Bacteroidota
GTG
His
>WENV170560527
CYGL01004825
306899
Bacteroidota
GTG
His
>WENV170560609
CYGL01011003
306899
Bacteroidota
GTG
His
>WENV170560294
CYGL01000406
312261
Bacteroidota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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