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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170571648
FLOH01000244
653537
Alphaproteobacteria
GGT
Thr
>WENV170572945
FLOH01001557
457049
Alphaproteobacteria
CCA
Trp
>WENV170571208
FLOH01000097
653534
Alphaproteobacteria
GCC
Gly
>WENV170572439
FLOH01000868
653534
Alphaproteobacteria
GCC
Gly
>WENV170572143
FLOH01000559
780661
Alphaproteobacteria
GCA
Cys
>WENV170570506
FLOH01000008
276089
Alphaproteobacteria
CCG
Arg
>WENV170570508
FLOH01000008
276089
Alphaproteobacteria
CCG
Arg
>WENV170572042
FLOH01000486
113418
Alphaproteobacteria
CAG
Leu
>WENV170571485
FLOH01000174
270796
Alphaproteobacteria
GTC
Asp
>WENV170571484
FLOH01000174
270796
Alphaproteobacteria
GTC
Asp
>WENV170571235
FLOH01000106
113086
Alphaproteobacteria
GAG
Leu
>WENV170570522
FLOH01000008
452755
Alphaproteobacteria
TAC
Val
>WENV170572289
FLOH01000702
653539
Alphaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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