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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170570927
FLOH01000040
451922
Gammaproteobacteria
TGT
Thr
>WENV170571674
FLOH01000255
278579
Gammaproteobacteria
GTC
Asp
>WENV170572216
FLOH01000632
271464
Gammaproteobacteria
TGG
Pro
>WENV170572642
FLOH01001098
271464
Gammaproteobacteria
TGG
Pro
>WENV170571603
FLOH01000223
270982
Gammaproteobacteria
GAT
Ile
>WENV170572485
FLOH01000922
278942
Gammaproteobacteria
CCG
Arg
>WENV170573034
FLOH01004386
458351
Gammaproteobacteria
TTG
Gln
>WENV170572215
FLOH01000632
474503
Gammaproteobacteria
GTT
Asn
>WENV170571604
FLOH01000223
467082
Gammaproteobacteria
TGC
Ala
>WENV170571720
FLOH01000278
467082
Gammaproteobacteria
TGC
Ala
>WENV170572242
FLOH01000651
458525
Gammaproteobacteria
TAC
Val
>WENV170573032
FLOH01004386
271286
Gammaproteobacteria
CAT
Met
>WENV170573035
FLOH01004386
271286
Gammaproteobacteria
CAT
Met
>WENV170573033
FLOH01004386
181084
Gammaproteobacteria
TAG
Leu
>WENV170571295
FLOH01000122
456234
Gammaproteobacteria
GAA
Phe
>WENV170571832
FLOH01000333
466510
Gammaproteobacteria
GCC
Gly
>WENV170572217
FLOH01000632
455293
Gammaproteobacteria
TTT
Lys
>WENV170572218
FLOH01000632
455293
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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